RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 CFAP46Q8IYW2 2715 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 UBA6A0AVT1 1052 aaPredicted RBP16.85■□□□□ 0.29
USP39-208ENST00000455732 TLCD2A6NGC4 264 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 STMND1H3BQB6 276 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 NDC80O14777 642 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 KPNA5O15131 536 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 ATXN7O15265 892 aaPredicted RBP16.85■□□□□ 0.29
USP39-208ENST00000455732 KIF1CO43896 1103 aaKnown RBP16.85■□□□□ 0.29
USP39-208ENST00000455732 RASSF9O75901 435 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 APOA4P06727 396 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 ITGB6P18564 788 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 EIF3BP55884 814 aaKnown RBP16.85■□□□□ 0.29
USP39-208ENST00000455732 DHX9Q08211 1270 aaKnown RBP16.85■□□□□ 0.29
USP39-208ENST00000455732 HSPA14Q0VDF9 509 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 CRYMQ14894 314 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 BRD3Q15059 726 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 LONRF1Q17RB8 773 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 DCAF12Q5T6F0 453 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 CACHD1Q5VU97 1274 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 ANKS6Q68DC2 871 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 ZNF470Q6ECI4 717 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 NAPRTQ6XQN6 538 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 FAM92BQ6ZTR7 304 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 KRT222Q8N1A0 295 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.85■□□□□ 0.29
USP39-208ENST00000455732 OR52E1Q8NGJ3 308 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 OR5K2Q8NHB8 316 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 CALML6Q8TD86 181 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 LCN9Q8WX39 176 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 SNF8Q96H20 258 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 EBNA1BP2Q99848 306 aaKnown RBP16.85■□□□□ 0.29
USP39-208ENST00000455732 ZPBPQ9BS86 351 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 HGH1Q9BTY7 390 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 SPRY4Q9C004 299 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 TRIT1Q9H3H1 467 aaKnown RBP16.85■□□□□ 0.29
USP39-208ENST00000455732 SRMSQ9H3Y6 488 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 POLG2Q9UHN1 485 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 ASF1AQ9Y294 204 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 FAM169AQ9Y6X4 670 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 COL6A6A6NMZ7 2263 aa16.85■□□□□ 0.29
USP39-208ENST00000455732 OR6C74A6NCV1 312 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 TK2O00142 265 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 TP73O15350 636 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 NELFEP18615 380 aaKnown RBP16.84■□□□□ 0.29
USP39-208ENST00000455732 RHDQ02161 417 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 THOC5Q13769 683 aaKnown RBP16.84■□□□□ 0.29
USP39-208ENST00000455732 MSS51Q4VC12 460 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 DNTTIP2Q5QJE6 756 aaKnown RBP16.84■□□□□ 0.29
USP39-208ENST00000455732 ARMC6Q6NXE6 501 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 CEACAM20Q6UY09 585 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 ZNF572Q7Z3I7 529 aaPredicted RBP16.84■□□□□ 0.29
USP39-208ENST00000455732 KMT5CQ86Y97 462 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 VRK3Q8IV63 474 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 PDIK1LQ8N165 341 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 LSM14AQ8ND56 463 aaKnown RBP16.84■□□□□ 0.29
USP39-208ENST00000455732 PHC3Q8NDX5 983 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 OR5AR1Q8NGP9 310 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 SLC39A7Q92504 469 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 NKD1Q969G9 470 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 LRRC39Q96DD0 335 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 SLC41A2Q96JW4 573 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 FAM167BQ9BTA0 163 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 APMAPQ9HDC9 416 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 C20orf96Q9NUD7 363 aaPredicted RBP16.84■□□□□ 0.29
USP39-208ENST00000455732 IL1RAPL1Q9NZN1 696 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 POMT2Q9UKY4 750 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 PCDHB11Q9Y5F2 797 aa16.84■□□□□ 0.29
USP39-208ENST00000455732 IGHV5-51A0A0C4DH38 117 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 FAM187AA6NFU0 413 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 EFCAB8A8MWE9 144 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 ERVH48-1M5A8F1 160 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 S1PR4O95977 384 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 PRB1P04280 392 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 RPN2P04844 631 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 ATP5DP30049 168 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 FMO4P31512 558 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 ITGA8P53708 1063 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 C19orf57Q0VDD7 668 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 PRKAA1Q13131 559 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 CBLBQ13191 982 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 GBX1Q14549 363 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 BBS9Q3SYG4 887 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 SPANXN3Q5MJ09 141 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 MANEAQ5SRI9 462 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 PLEKHS1Q5SXH7 462 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 UNC5DQ6UXZ4 953 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 OTOAQ7RTW8 1153 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 MAATS1Q7Z4T9 603 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 VASH2Q86V25 355 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 AMIGO1Q86WK6 493 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 OR4E2Q8NGC2 313 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 TTC9Q92623 222 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 MAP3K3Q99759 626 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 CTRCQ99895 268 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 TWSG1Q9GZX9 223 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 LATS2Q9NRM7 1088 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 ICKQ9UPZ9 632 aa16.83■□□□□ 0.28
USP39-208ENST00000455732 SPTBP11277 2137 aa16.82■□□□□ 0.28
USP39-208ENST00000455732 POLR1CO15160 346 aaPredicted RBP16.82■□□□□ 0.28
USP39-208ENST00000455732 KDM1AO60341 852 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms