RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 SLC6A20Q9NP91 592 aa22.44■■□□□ 1.18
PTPRA-208ENST00000455631 TXLNGQ9NUQ3 528 aa22.44■■□□□ 1.18
PTPRA-208ENST00000455631 IRAK4Q9NWZ3 460 aa22.44■■□□□ 1.18
PTPRA-208ENST00000455631 FBXL4Q9UKA2 621 aa22.44■■□□□ 1.18
PTPRA-208ENST00000455631 PDZD2O15018 2839 aa22.44■■□□□ 1.18
PTPRA-208ENST00000455631 ANKRD12Q6UB98 2062 aa22.43■■□□□ 1.18
PTPRA-208ENST00000455631 ZSCAN9O15535 394 aaPredicted RBP22.43■■□□□ 1.18
PTPRA-208ENST00000455631 AGAP7PQ5VUJ5 663 aa22.43■■□□□ 1.18
PTPRA-208ENST00000455631 B3GNTL1Q67FW5 361 aaPredicted RBP22.43■■□□□ 1.18
PTPRA-208ENST00000455631 MRPL14Q6P1L8 145 aaKnown RBP22.43■■□□□ 1.18
PTPRA-208ENST00000455631 ALKBH5Q6P6C2 394 aaKnown RBP22.43■■□□□ 1.18
PTPRA-208ENST00000455631 TRIM73Q86UV7 250 aa22.43■■□□□ 1.18
PTPRA-208ENST00000455631 AMIGO1Q86WK6 493 aa22.43■■□□□ 1.18
PTPRA-208ENST00000455631 ZNF655Q8N720 491 aaPredicted RBP22.43■■□□□ 1.18
PTPRA-208ENST00000455631 LURAP1Q96LR2 239 aa22.43■■□□□ 1.18
PTPRA-208ENST00000455631 AGAP4Q96P64 663 aa22.43■■□□□ 1.18
PTPRA-208ENST00000455631 SLX1AQ9BQ83 275 aa22.43■■□□□ 1.18
PTPRA-208ENST00000455631 HGH1Q9BTY7 390 aa22.43■■□□□ 1.18
PTPRA-208ENST00000455631 XKR8Q9H6D3 395 aa22.43■■□□□ 1.18
PTPRA-208ENST00000455631 ITGB1BP2Q9UKP3 347 aa22.43■■□□□ 1.18
PTPRA-208ENST00000455631 H3BMH7 237 aa22.42■■□□□ 1.18
PTPRA-208ENST00000455631 STX7O15400 261 aaKnown RBP22.42■■□□□ 1.18
PTPRA-208ENST00000455631 HCRTR1O43613 425 aa22.42■■□□□ 1.18
PTPRA-208ENST00000455631 NFKB1P19838 968 aa22.42■■□□□ 1.18
PTPRA-208ENST00000455631 CD68P34810 354 aaPredicted RBP22.42■■□□□ 1.18
PTPRA-208ENST00000455631 DYNLT1P63172 113 aa22.42■■□□□ 1.18
PTPRA-208ENST00000455631 ART3Q13508 389 aa22.42■■□□□ 1.18
PTPRA-208ENST00000455631 SLC1A5Q15758 541 aa22.42■■□□□ 1.18
PTPRA-208ENST00000455631 NKAIN1Q4KMZ8 207 aa22.42■■□□□ 1.18
PTPRA-208ENST00000455631 SARM1Q6SZW1 724 aa22.42■■□□□ 1.18
PTPRA-208ENST00000455631 SPESP1Q6UW49 350 aa22.42■■□□□ 1.18
PTPRA-208ENST00000455631 IGFL2Q6UWQ7 119 aa22.42■■□□□ 1.18
PTPRA-208ENST00000455631 PARP9Q8IXQ6 854 aa22.42■■□□□ 1.18
PTPRA-208ENST00000455631 DCUN1D1Q96GG9 259 aa22.42■■□□□ 1.18
PTPRA-208ENST00000455631 MRGPRX2Q96LB1 330 aa22.42■■□□□ 1.18
PTPRA-208ENST00000455631 TFB2MQ9H5Q4 396 aaKnown RBP22.42■■□□□ 1.18
PTPRA-208ENST00000455631 EPS8L2Q9H6S3 715 aa22.42■■□□□ 1.18
PTPRA-208ENST00000455631 LMBRD1Q9NUN5 540 aa22.42■■□□□ 1.18
PTPRA-208ENST00000455631 OLAHQ9NV23 265 aa22.42■■□□□ 1.18
PTPRA-208ENST00000455631 CELSR1Q9NYQ6 3014 aa22.41■■□□□ 1.18
PTPRA-208ENST00000455631 ZNF487B1APH4 448 aa22.41■■□□□ 1.18
PTPRA-208ENST00000455631 IFRD1O00458 451 aaPredicted RBP22.41■■□□□ 1.18
PTPRA-208ENST00000455631 SGTAO43765 313 aa22.41■■□□□ 1.18
PTPRA-208ENST00000455631 EPOP01588 193 aa22.41■■□□□ 1.18
PTPRA-208ENST00000455631 SNRPB2P08579 225 aaKnown RBP22.41■■□□□ 1.18
PTPRA-208ENST00000455631 PTGER4P35408 488 aa22.41■■□□□ 1.18
PTPRA-208ENST00000455631 TLR1Q15399 786 aa22.41■■□□□ 1.18
PTPRA-208ENST00000455631 RFX6Q8HWS3 928 aa22.41■■□□□ 1.18
PTPRA-208ENST00000455631 ADGRF3Q8IZF5 1079 aa22.41■■□□□ 1.18
PTPRA-208ENST00000455631 NXPE1Q8N323 547 aa22.41■■□□□ 1.18
PTPRA-208ENST00000455631 PHC3Q8NDX5 983 aa22.41■■□□□ 1.18
PTPRA-208ENST00000455631 IPMKQ8NFU5 416 aa22.41■■□□□ 1.18
PTPRA-208ENST00000455631 ASB8Q9H765 288 aa22.41■■□□□ 1.18
PTPRA-208ENST00000455631 CDC23Q9UJX2 597 aa22.41■■□□□ 1.18
PTPRA-208ENST00000455631 KLF2Q9Y5W3 355 aaPredicted RBP22.41■■□□□ 1.18
PTPRA-208ENST00000455631 JRKO75564 520 aa22.4■■□□□ 1.18
PTPRA-208ENST00000455631 SERPING1P05155 500 aa22.4■■□□□ 1.18
PTPRA-208ENST00000455631 CTSBP07858 339 aa22.4■■□□□ 1.18
PTPRA-208ENST00000455631 RALBP11234 206 aa22.4■■□□□ 1.18
PTPRA-208ENST00000455631 ZFXP17010 805 aaPredicted RBP22.4■■□□□ 1.18
PTPRA-208ENST00000455631 PRLHRP49683 370 aa22.4■■□□□ 1.18
PTPRA-208ENST00000455631 OTUD4Q01804 1114 aaKnown RBP22.4■■□□□ 1.18
PTPRA-208ENST00000455631 PRKG2Q13237 762 aa22.4■■□□□ 1.18
PTPRA-208ENST00000455631 FCRL6Q6DN72 434 aa22.4■■□□□ 1.18
PTPRA-208ENST00000455631 BCORP1Q8N888 145 aa22.4■■□□□ 1.18
PTPRA-208ENST00000455631 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.4■■□□□ 1.181e-6■■■■■ 31.4
PTPRA-208ENST00000455631 COG4Q9H9E3 785 aa22.4■■□□□ 1.18
PTPRA-208ENST00000455631 UVRAGQ9P2Y5 699 aa22.4■■□□□ 1.18
PTPRA-208ENST00000455631 CRLS1Q9UJA2 301 aa22.4■■□□□ 1.18
PTPRA-208ENST00000455631 ARL5AQ9Y689 179 aa22.4■■□□□ 1.18
PTPRA-208ENST00000455631 CCDC78A2IDD5 438 aa22.39■■□□□ 1.17
PTPRA-208ENST00000455631 C3orf70A6NLC5 250 aaPredicted RBP22.39■■□□□ 1.17
PTPRA-208ENST00000455631 SRP72O76094 671 aaKnown RBP22.39■■□□□ 1.17
PTPRA-208ENST00000455631 MMP11P24347 488 aa22.39■■□□□ 1.17
PTPRA-208ENST00000455631 KCNK10P57789 538 aa22.39■■□□□ 1.17
PTPRA-208ENST00000455631 PRKD1Q15139 912 aaPredicted RBP22.39■■□□□ 1.17
PTPRA-208ENST00000455631 ZIC1Q15915 447 aa22.39■■□□□ 1.17
PTPRA-208ENST00000455631 TLDC1Q6P9B6 456 aa22.39■■□□□ 1.17
PTPRA-208ENST00000455631 CPLX3Q8WVH0 158 aa22.39■■□□□ 1.17
PTPRA-208ENST00000455631 ITLN2Q8WWU7 325 aaPredicted RBP22.39■■□□□ 1.17
PTPRA-208ENST00000455631 RELTQ969Z4 430 aa22.39■■□□□ 1.17
PTPRA-208ENST00000455631 OXNAD1Q96HP4 312 aaPredicted RBP22.39■■□□□ 1.17
PTPRA-208ENST00000455631 NAP1L5Q96NT1 182 aaPredicted RBP22.39■■□□□ 1.17
PTPRA-208ENST00000455631 NDC1Q9BTX1 674 aa22.39■■□□□ 1.17
PTPRA-208ENST00000455631 OR52A5Q9H2C5 316 aa22.39■■□□□ 1.17
PTPRA-208ENST00000455631 MVB12BQ9H7P6 319 aa22.39■■□□□ 1.17
PTPRA-208ENST00000455631 KLHL8Q9P2G9 620 aaPredicted RBP22.39■■□□□ 1.17
PTPRA-208ENST00000455631 FKBPLQ9UIM3 349 aa22.39■■□□□ 1.17
PTPRA-208ENST00000455631 MYO7BQ6PIF6 2116 aa22.39■■□□□ 1.17
PTPRA-208ENST00000455631 CNTRLQ7Z7A1 2325 aa22.39■■□□□ 1.17
PTPRA-208ENST00000455631 A0A1B0GTH6 734 aa22.38■■□□□ 1.17
PTPRA-208ENST00000455631 KRT1P04264 644 aa22.38■■□□□ 1.17
PTPRA-208ENST00000455631 UGT2B7P16662 529 aa22.38■■□□□ 1.17
PTPRA-208ENST00000455631 GABRA4P48169 554 aa22.38■■□□□ 1.17
PTPRA-208ENST00000455631 FIGNQ5HY92 759 aa22.38■■□□□ 1.17
PTPRA-208ENST00000455631 VSIG1Q86XK7 387 aa22.38■■□□□ 1.17
PTPRA-208ENST00000455631 NACC2Q96BF6 587 aa22.38■■□□□ 1.17
PTPRA-208ENST00000455631 MAGEB10Q96LZ2 347 aaPredicted RBP22.38■■□□□ 1.17
PTPRA-208ENST00000455631 FSD1LQ9BXM9 530 aa22.38■■□□□ 1.17
PTPRA-208ENST00000455631 LCMT1Q9UIC8 334 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms