RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 SLC16A3O15427 465 aaKnown RBP3.65□□□□□ -1.83
RBM39-220ENST00000455343 P4HA2O15460 535 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 B3GALT2O43825 422 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 NRP2O60462 931 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 DAB1O75553 588 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 CREG1O75629 220 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 GRAP2O75791 330 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 CEACAM4O75871 244 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 DNAJB5O75953 348 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 RECQL5O94762 991 aaPredicted RBP3.65□□□□□ -1.83
RBM39-220ENST00000455343 F9P00740 461 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 GM2AP17900 193 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 AK4P27144 223 aaPredicted RBP3.65□□□□□ -1.83
RBM39-220ENST00000455343 APOBEC3AP31941 199 aaPredicted RBP3.65□□□□□ -1.83
RBM39-220ENST00000455343 MAN1A1P33908 653 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 MMP12P39900 470 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 LEPRP48357 1165 aaKnown RBP3.65□□□□□ -1.83
RBM39-220ENST00000455343 FMO5P49326 533 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 GZMKP49863 264 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 GEMIN4P57678 1058 aaKnown RBP3.65□□□□□ -1.83
RBM39-220ENST00000455343 FKBP3Q00688 224 aaKnown RBP3.65□□□□□ -1.83
RBM39-220ENST00000455343 NME3Q13232 169 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 LAMB3Q13751 1172 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 RAPGEF1Q13905 1077 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 ERV3-1Q14264 604 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 POLD3Q15054 466 aaPredicted RBP3.65□□□□□ -1.83
RBM39-220ENST00000455343 COBLL1Q53SF7 1204 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 PRR30Q53SZ7 412 aaPredicted RBP3.65□□□□□ -1.83
RBM39-220ENST00000455343 INO80DQ53TQ3 878 aaPredicted RBP3.65□□□□□ -1.83
RBM39-220ENST00000455343 ZRANB3Q5FWF4 1079 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 HECTD2Q5U5R9 776 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 MANEALQ5VSG8 457 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 AFMIDQ63HM1 303 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 JMJD6Q6NYC1 403 aaPredicted RBP3.65□□□□□ -1.83
RBM39-220ENST00000455343 WDR74Q6RFH5 385 aaPredicted RBP3.65□□□□□ -1.83
RBM39-220ENST00000455343 LRRC31Q6UY01 552 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 RRAGAQ7L523 313 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 KDELC2Q7Z4H8 507 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 TMEM135Q86UB9 458 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 PRIMA1Q86XR5 153 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 XYLT1Q86Y38 959 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 NRSN1Q8IZ57 195 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 PELI3Q8N2H9 469 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 CBARPQ8N350 705 aaPredicted RBP3.65□□□□□ -1.83
RBM39-220ENST00000455343 PPM1KQ8N3J5 372 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 LILRA3Q8N6C8 439 aaPredicted RBP3.65□□□□□ -1.83
RBM39-220ENST00000455343 PDCD6IPQ8WUM4 868 aaKnown RBP3.65□□□□□ -1.83
RBM39-220ENST00000455343 PATE1Q8WXA2 126 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 C5orf34Q96MH7 638 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 NT5C1BQ96P26 610 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 NDC1Q9BTX1 674 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 GSDMCQ9BYG8 508 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 ZYG11BQ9C0D3 744 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 MAGEH1Q9H213 219 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 UPF2Q9HAU5 1272 aaKnown RBP3.65□□□□□ -1.83
RBM39-220ENST00000455343 ACP6Q9NPH0 428 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 TAAR2Q9P1P5 351 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 USP25Q9UHP3 1055 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 RCOR1Q9UKL0 485 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 NEU3Q9UQ49 428 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 CHST2Q9Y4C5 530 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 ABCA2Q9BZC7 2435 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 SCN8AQ9UQD0 1980 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 MED13Q9UHV7 2174 aa3.65□□□□□ -1.83
RBM39-220ENST00000455343 DCHS2Q6V1P9 2916 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 NIPBLQ6KC79 2804 aaeCLIP3.64□□□□□ -1.839e-8■□□□□ 8.9
RBM39-220ENST00000455343 HEATR9A2RTY3 570 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 ZSCAN5CA6NGD5 496 aaPredicted RBP3.64□□□□□ -1.83
RBM39-220ENST00000455343 BECN2A8MW95 431 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 INSIG1O15503 277 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 MED7O43513 233 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 KDELR3O43731 214 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 SRGAP2O75044 1071 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 LETM1O95202 739 aaPredicted RBP3.64□□□□□ -1.83
RBM39-220ENST00000455343 NUDT3O95989 172 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 PCCBP05166 539 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 ANKRD34CP0C6C1 535 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 MYCLP1P12525 358 aaPredicted RBP3.64□□□□□ -1.83
RBM39-220ENST00000455343 PFKFB1P16118 471 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 CMA1P23946 247 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 NFKBIAP25963 317 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 DLSTP36957 453 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 PHC1P78364 1004 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 DUSP2Q05923 314 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 RAD51Q06609 339 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 MGAT5Q09328 741 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 ILF3Q12906 894 aaKnown RBP eCLIP3.64□□□□□ -1.831e-8■■■■□ 22.3
RBM39-220ENST00000455343 RALGDSQ12967 914 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 PEX6Q13608 980 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 SLC25A52Q3SY17 297 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 PTPN20Q4JDL3 420 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.64□□□□□ -1.83
RBM39-220ENST00000455343 ATXN7L2Q5T6C5 722 aaPredicted RBP3.64□□□□□ -1.83
RBM39-220ENST00000455343 ANKRD40Q6AI12 368 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 SP5Q6BEB4 398 aaPredicted RBP3.64□□□□□ -1.83
RBM39-220ENST00000455343 PNCKQ6P2M8 343 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 BRAT1Q6PJG6 821 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 SPNS3Q6ZMD2 512 aa3.64□□□□□ -1.83
RBM39-220ENST00000455343 C11orf57Q6ZUT1 292 aaPredicted RBP3.64□□□□□ -1.83
RBM39-220ENST00000455343 FAM183BPQ6ZVS7 135 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms