RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 BTN2A2Q8WVV5 523 aa13.36□□□□□ -0.27
CLK3-203ENST00000454830 P2RY13Q9BPV8 354 aa13.36□□□□□ -0.27
CLK3-203ENST00000454830 DPY30Q9C005 99 aa13.36□□□□□ -0.27
CLK3-203ENST00000454830 SLC32A1Q9H598 525 aa13.36□□□□□ -0.27
CLK3-203ENST00000454830 PRKAB1Q9Y478 270 aa13.36□□□□□ -0.27
CLK3-203ENST00000454830 KPNA5O15131 536 aa13.36□□□□□ -0.27
CLK3-203ENST00000454830 C8GP07360 202 aa13.36□□□□□ -0.27
CLK3-203ENST00000454830 ACADSP16219 412 aa13.36□□□□□ -0.27
CLK3-203ENST00000454830 IRF8Q02556 426 aa13.36□□□□□ -0.27
CLK3-203ENST00000454830 NAE1Q13564 534 aa13.36□□□□□ -0.27
CLK3-203ENST00000454830 AAK1Q2M2I8 961 aa13.36□□□□□ -0.27
CLK3-203ENST00000454830 SLC2A7Q6PXP3 512 aa13.36□□□□□ -0.27
CLK3-203ENST00000454830 BLOC1S3Q6QNY0 202 aa13.36□□□□□ -0.27
CLK3-203ENST00000454830 GFM2Q969S9 779 aaKnown RBP13.36□□□□□ -0.27
CLK3-203ENST00000454830 TIFAQ96CG3 184 aa13.36□□□□□ -0.27
CLK3-203ENST00000454830 LRRC58Q96CX6 371 aa13.36□□□□□ -0.27
CLK3-203ENST00000454830 PPP3R2Q96LZ3 170 aa13.36□□□□□ -0.27
CLK3-203ENST00000454830 TMEM74Q96NL1 305 aa13.36□□□□□ -0.27
CLK3-203ENST00000454830 KNL1Q8NG31 2342 aa13.36□□□□□ -0.27
CLK3-203ENST00000454830 BCAS2O75934 225 aaPredicted RBP13.35□□□□□ -0.27
CLK3-203ENST00000454830 BDKRB1P46663 353 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 GTF2H3Q13889 308 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 STARD3Q14849 445 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 CACHD1Q5VU97 1274 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 RNF111Q6ZNA4 994 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 ROPN1LQ96C74 230 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 MAP10Q9P2G4 905 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 MSRAQ9UJ68 235 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 LEF1Q9UJU2 399 aaPredicted RBP13.35□□□□□ -0.27
CLK3-203ENST00000454830 BRWD1Q9NSI6 2320 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 GON4LQ3T8J9 2241 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 EDDM13A0A1B0GTR0 161 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 AKAP10O43572 662 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 MMP12P39900 470 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 ERVK-21P61565 698 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 HNRNPA1L2Q32P51 320 aaKnown RBP13.35□□□□□ -0.27
CLK3-203ENST00000454830 PAGE3Q5JUK9 113 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 TLDC1Q6P9B6 456 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 DPPA4Q7L190 304 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 UBE2Q1Q7Z7E8 422 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 RALGPS2Q86X27 583 aaPredicted RBP13.35□□□□□ -0.27
CLK3-203ENST00000454830 SYTL1Q8IYJ3 562 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 RASGEF1AQ8N9B8 481 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 VOPP1Q96AW1 172 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 EME1Q96AY2 570 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 ARRDC3Q96B67 414 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 ASB9Q96DX5 294 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 PPP1R16AQ96I34 528 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 ANKRD27Q96NW4 1050 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 LRTM1Q9HBL6 345 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 RAD18Q9NS91 495 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 SLAMF8Q9P0V8 285 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.35□□□□□ -0.27
CLK3-203ENST00000454830 HOXC11O43248 304 aaPredicted RBP13.35□□□□□ -0.27
CLK3-203ENST00000454830 CATP04040 527 aaKnown RBP13.35□□□□□ -0.27
CLK3-203ENST00000454830 ZCCHC18P0CG32 403 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 GDI1P31150 447 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 MAGEA10P43363 369 aaPredicted RBP13.35□□□□□ -0.27
CLK3-203ENST00000454830 GNPDA1P46926 289 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 AQP4P55087 323 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 CHIT1Q13231 466 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 LDLRAP1Q5SW96 308 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 THEMIS2Q5TEJ8 643 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 AMIGO2Q86SJ2 522 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 TERB1Q8NA31 727 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 LRIG1Q96JA1 1093 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 TSSK3Q96PN8 268 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 MOSPD1Q9UJG1 213 aa13.35□□□□□ -0.27
CLK3-203ENST00000454830 A0A1W2PP18 115 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 AGAP14A8MT82 685 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 K7ESM1 405 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 MANBAO00462 879 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 LRATO95237 230 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 PSMC3P17980 439 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 SEC13P55735 322 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 DUSP6Q16828 381 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 SFT2D3Q587I9 215 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 XKR7Q5GH72 579 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 OGFOD2Q6N063 350 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 ZFP1Q6P2D0 407 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 SPPL2CQ8IUH8 684 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 RGL4Q8IZJ4 473 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 LIX1Q8N485 282 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 LMNTD1Q8N9Z9 388 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 VN1R2Q8NFZ6 395 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 CXorf40AQ8TE69 158 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 NUS1Q96E22 293 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 HOPXQ9BPY8 73 aaPredicted RBP13.34□□□□□ -0.27
CLK3-203ENST00000454830 EFHD1Q9BUP0 239 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 DNAJC11Q9NVH1 559 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 AP4S1Q9Y587 144 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 UNC80Q8N2C7 3258 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 H3BM21 787 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 NME4O00746 187 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 NCK1P16333 377 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 ELAVL3Q14576 367 aaKnown RBP13.34□□□□□ -0.27
CLK3-203ENST00000454830 PDGFRLQ15198 375 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 XKR6Q5GH73 641 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 HENMT1Q5T8I9 393 aaKnown RBP13.34□□□□□ -0.27
CLK3-203ENST00000454830 TMEM154Q6P9G4 183 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms