RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 PCDHGA3Q9Y5H0 932 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 COMMD10Q9Y6G5 202 aa13.78□□□□□ -0.2
HDAC4-205ENST00000454542 TLCD2A6NGC4 264 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 C9orf172C9J069 976 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 MATN2O00339 956 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 NVLO15381 856 aaKnown RBP13.77□□□□□ -0.21
HDAC4-205ENST00000454542 JMJD7P0C870 316 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 TPBGLP0DKB5 382 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 ERVK-10P10266 1014 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 CCL4P13236 92 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 GABRB3P28472 473 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 RBMS1P29558 406 aaKnown RBP13.77□□□□□ -0.21
HDAC4-205ENST00000454542 CSTF2P33240 577 aaKnown RBP eCLIP13.77□□□□□ -0.21
HDAC4-205ENST00000454542 EIF2S3P41091 472 aaKnown RBP13.77□□□□□ -0.21
HDAC4-205ENST00000454542 CLCN7P51798 805 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 PCBP4P57723 403 aaKnown RBP13.77□□□□□ -0.21
HDAC4-205ENST00000454542 HSPA14Q0VDF9 509 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 PDIA2Q13087 525 aaKnown RBP13.77□□□□□ -0.21
HDAC4-205ENST00000454542 GRB7Q14451 532 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 C8orf74Q6P047 294 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 TRMT10BQ6PF06 316 aaKnown RBP13.77□□□□□ -0.21
HDAC4-205ENST00000454542 ANKRD11Q6UB99 2663 aaPredicted RBP13.77□□□□□ -0.21
HDAC4-205ENST00000454542 OTOAQ7RTW8 1153 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 DCUN1D3Q8IWE4 304 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 MMGT1Q8N4V1 131 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 FBXO36Q8NEA4 188 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 GSDMBQ8TAX9 411 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 FGF11Q92914 225 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 PMEPA1Q969W9 287 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 CFAP36Q96G28 342 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 ZDHHC12Q96GR4 267 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 TGM7Q96PF1 710 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 FERD3LQ96RJ6 166 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 AARSD1Q9BTE6 412 aaKnown RBP13.77□□□□□ -0.21
HDAC4-205ENST00000454542 DDA1Q9BW61 102 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 TRIT1Q9H3H1 467 aaKnown RBP13.77□□□□□ -0.21
HDAC4-205ENST00000454542 AKAP7Q9P0M2 348 aaPredicted RBP13.77□□□□□ -0.21
HDAC4-205ENST00000454542 GALPQ9UBC7 116 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 POLG2Q9UHN1 485 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 POMT2Q9UKY4 750 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 ASF1AQ9Y294 204 aa13.77□□□□□ -0.21
HDAC4-205ENST00000454542 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.76□□□□□ -0.21
HDAC4-205ENST00000454542 KIF1CO43896 1103 aaKnown RBP13.76□□□□□ -0.21
HDAC4-205ENST00000454542 PKLRP30613 574 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 KPNA2P52292 529 aaKnown RBP13.76□□□□□ -0.21
HDAC4-205ENST00000454542 CSE1LP55060 971 aaKnown RBP13.76□□□□□ -0.21
HDAC4-205ENST00000454542 RAB15P59190 212 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 MC2RQ01718 297 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 CAV1Q03135 178 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 TEDDM1Q5T9Z0 273 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 IRGCQ6NXR0 463 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 CNSTQ6PJW8 725 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 RASGRP3Q8IV61 690 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 ADGRF3Q8IZF5 1079 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 ZBTB2Q8N680 514 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 NOA1Q8NC60 698 aaKnown RBP13.76□□□□□ -0.21
HDAC4-205ENST00000454542 PHC3Q8NDX5 983 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 KIF18AQ8NI77 898 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 GABPB2Q8TAK5 448 aaPredicted RBP13.76□□□□□ -0.21
HDAC4-205ENST00000454542 FBXO25Q8TCJ0 367 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 UBXN4Q92575 508 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 ZNF592Q92610 1267 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 SLC41A2Q96JW4 573 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 SLC30A3Q99726 388 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 NRTNQ99748 197 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 PITPNM3Q9BZ71 974 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 HRASLS2Q9NWW9 162 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 OCIAD1Q9NX40 245 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 MOCS1Q9NZB8 636 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 FOXJ2Q9P0K8 574 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 SLC17A6Q9P2U8 582 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 KLHL3Q9UH77 587 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 SSUH2Q9Y2M2 353 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 PKD1L2Q7Z442 2459 aa13.76□□□□□ -0.21
HDAC4-205ENST00000454542 SDK2Q58EX2 2172 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 OR6C74A6NCV1 312 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 EFCAB7A8K855 629 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 EIF3FO00303 357 aaPredicted RBP13.75□□□□□ -0.21
HDAC4-205ENST00000454542 BTN3A3O00478 584 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 BTN3A1O00481 513 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 PRAMEF10O60809 474 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 HAUS5O94927 633 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 MATN4O95460 622 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 C1QAP02745 245 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 NELFEP18615 380 aaKnown RBP13.75□□□□□ -0.21
HDAC4-205ENST00000454542 CD9P21926 228 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 CD82P27701 267 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 SLC5A2P31639 672 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 SHMT2P34897 504 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 PPM1FP49593 454 aaPredicted RBP13.75□□□□□ -0.21
HDAC4-205ENST00000454542 TIAL1Q01085 375 aaKnown RBP eCLIP13.75□□□□□ -0.21
HDAC4-205ENST00000454542 KRT33BQ14525 404 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 TRADDQ15628 312 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 KYNUQ16719 465 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 DNTTIP2Q5QJE6 756 aaKnown RBP13.75□□□□□ -0.21
HDAC4-205ENST00000454542 SNAP47Q5SQN1 464 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 HP1BP3Q5SSJ5 553 aaPredicted RBP13.75□□□□□ -0.21
HDAC4-205ENST00000454542 FOXR1Q6PIV2 292 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 FAM92BQ6ZTR7 304 aa13.75□□□□□ -0.21
HDAC4-205ENST00000454542 NEK10Q6ZWH5 1172 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms