RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 PCDHGA6Q9Y5G7 932 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 PRSS21Q9Y6M0 314 aa12.52□□□□□ -0.41
CHD3-206ENST00000452447 MED13Q9UHV7 2174 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 CDC14CA4D256 554 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 C2orf74A8MZ97 194 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 BTN3A3O00478 584 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 WISP1O95388 367 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 RECKO95980 971 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 GOT2P00505 430 aaKnown RBP12.51□□□□□ -0.41
CHD3-206ENST00000452447 BOP1Q14137 746 aaKnown RBP12.51□□□□□ -0.41
CHD3-206ENST00000452447 CCNG2Q16589 344 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 FASTKD1Q53R41 847 aaKnown RBP12.51□□□□□ -0.41
CHD3-206ENST00000452447 FAM199XQ6PEV8 388 aaPredicted RBP12.51□□□□□ -0.41
CHD3-206ENST00000452447 PRUNE1Q86TP1 453 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 PPHLN1Q8NEY8 458 aaKnown RBP12.51□□□□□ -0.41
CHD3-206ENST00000452447 OR4L1Q8NH43 312 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 SEC14L1Q92503 715 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 MR1Q95460 341 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 ABHD17AQ96GS6 310 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 TRIM4Q9C037 500 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 ACTL8Q9H568 366 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 SYTL2Q9HCH5 934 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 CASS4Q9NQ75 786 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 ZNF71Q9NQZ8 489 aaPredicted RBP12.51□□□□□ -0.41
CHD3-206ENST00000452447 LATS2Q9NRM7 1088 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 SLC2A6Q9UGQ3 507 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 KCNMB2Q9Y691 235 aa12.51□□□□□ -0.41
CHD3-206ENST00000452447 OR1I1O60431 355 aa12.5□□□□□ -0.41
CHD3-206ENST00000452447 GSTA5Q7RTV2 222 aa12.5□□□□□ -0.41
CHD3-206ENST00000452447 TBC1D21Q8IYX1 336 aa12.5□□□□□ -0.41
CHD3-206ENST00000452447 OR5AR1Q8NGP9 310 aa12.5□□□□□ -0.41
CHD3-206ENST00000452447 MAIP1Q8WWC4 291 aa12.5□□□□□ -0.41
CHD3-206ENST00000452447 CPT1BQ92523 772 aa12.5□□□□□ -0.41
CHD3-206ENST00000452447 PEX13Q92968 403 aa12.5□□□□□ -0.41
CHD3-206ENST00000452447 ZNF778Q96MU6 729 aa12.5□□□□□ -0.41
CHD3-206ENST00000452447 TSSK1BQ9BXA7 367 aa12.5□□□□□ -0.41
CHD3-206ENST00000452447 SLC7A5P2Q9GIP4 190 aa12.5□□□□□ -0.41
CHD3-206ENST00000452447 CLMPQ9H6B4 373 aa12.5□□□□□ -0.41
CHD3-206ENST00000452447 XKR8Q9H6D3 395 aa12.5□□□□□ -0.41
CHD3-206ENST00000452447 AKIRIN1Q9H9L7 192 aaPredicted RBP12.5□□□□□ -0.41
CHD3-206ENST00000452447 POLG2Q9UHN1 485 aa12.5□□□□□ -0.41
CHD3-206ENST00000452447 SERTAD3Q9UJW9 196 aa12.5□□□□□ -0.41
CHD3-206ENST00000452447 TDRKHQ9Y2W6 561 aaKnown RBP12.5□□□□□ -0.41
CHD3-206ENST00000452447 TCAF1Q9Y4C2 921 aa12.5□□□□□ -0.41
CHD3-206ENST00000452447 TMEM150CB9EJG8 249 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 MKRN2OSH3BPM6 223 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 NRDCO43847 1150 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 KDM1AO60341 852 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 FGGP02679 453 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 ZSCAN5DPP0CG00 497 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 ST6GAL1P15907 406 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 CYP2A7P20853 494 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 PTPN4P29074 926 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 SHMT2P34897 504 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 RPL22P35268 128 aaKnown RBP12.49□□□□□ -0.41
CHD3-206ENST00000452447 CSRP3P50461 194 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 BASP1P80723 227 aaKnown RBP12.49□□□□□ -0.41
CHD3-206ENST00000452447 AARS2Q5JTZ9 985 aaKnown RBP12.49□□□□□ -0.41
CHD3-206ENST00000452447 PCID2Q5JVF3 399 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 C4orf22Q6V702 233 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 NAPRTQ6XQN6 538 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 ZNF662Q6ZS27 426 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 ADGRF3Q8IZF5 1079 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 GLIS1Q8NBF1 620 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 TRIM58Q8NG06 486 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 N4BP2L2Q92802 583 aaPredicted RBP12.49□□□□□ -0.41
CHD3-206ENST00000452447 CLIP3Q96DZ5 547 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 NRTNQ99748 197 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 PITPNM3Q9BZ71 974 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 KLHL25Q9H0H3 589 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 ACTR10Q9NZ32 417 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 FARSAQ9Y285 508 aaKnown RBP12.49□□□□□ -0.41
CHD3-206ENST00000452447 DRG1Q9Y295 367 aaKnown RBP12.49□□□□□ -0.41
CHD3-206ENST00000452447 MAN2B2Q9Y2E5 1009 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 ZKSCAN5Q9Y2L8 839 aa12.49□□□□□ -0.41
CHD3-206ENST00000452447 SLC5A10A0PJK1 596 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 AP3B1O00203 1094 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 MEN1O00255 615 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 FURINP09958 794 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 MSL3P1P0C860 447 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 ACADLP28330 430 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 CSE1LP55060 971 aaKnown RBP12.48□□□□□ -0.41
CHD3-206ENST00000452447 SESN2P58004 480 aaPredicted RBP12.48□□□□□ -0.41
CHD3-206ENST00000452447 ACVR1Q04771 509 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 GPS2Q13227 327 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 LACTB2Q53H82 288 aaPredicted RBP12.48□□□□□ -0.41
CHD3-206ENST00000452447 DRICH1Q6PGQ1 229 aaPredicted RBP12.48□□□□□ -0.41
CHD3-206ENST00000452447 SPESP1Q6UW49 350 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 UNC5AQ6ZN44 842 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 ZNF534Q76KX8 674 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 SYVN1Q86TM6 617 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 TMEM135Q86UB9 458 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 LRRC8AQ8IWT6 810 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 SLC38A9Q8NBW4 561 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 OR5K2Q8NHB8 316 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 SGSM3Q96HU1 749 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 LRFN5Q96NI6 719 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 TRAPPC9Q96Q05 1148 aa12.48□□□□□ -0.41
CHD3-206ENST00000452447 ACTR5Q9H9F9 607 aaPredicted RBP12.48□□□□□ -0.41
CHD3-206ENST00000452447 EIF2B3Q9NR50 452 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms