RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 PSD3Q9NYI0 1048 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 PSMD13Q9UNM6 376 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 PCDHB11Q9Y5F2 797 aa16.67■□□□□ 0.26
PRPF40A-204ENST00000450303 CCDC162PA2VCL2 907 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 LILRA5A6NI73 299 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 GOLGA6L10A6NI86 522 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 RIPK2O43353 540 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 SRP72O76094 671 aaKnown RBP16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 ACSL3O95573 720 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 GOT2P00505 430 aaKnown RBP16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 ABHD2P08910 425 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 AMD1P17707 334 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 MSH3P20585 1137 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 GFERP55789 205 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 GPX6P59796 221 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 RHDQ02161 417 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 CACNG1Q06432 222 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 DMTNQ08495 405 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 MGAT5Q09328 741 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 NFE2L1Q14494 772 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 GPR33Q49SQ1 333 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 ZRANB3Q5FWF4 1079 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 AARS2Q5JTZ9 985 aaKnown RBP16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 MANEAQ5SRI9 462 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 LYPLAL1Q5VWZ2 237 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 ANKS6Q68DC2 871 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 MRNIPQ6NTE8 343 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 SNX20Q7Z614 316 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 SDCCAG8Q86SQ7 713 aaPredicted RBP16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 DTX1Q86Y01 620 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 AVL9Q8NBF6 648 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 ULK4Q96C45 1275 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 SGF29Q96ES7 293 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 CATSPERZQ9NTU4 200 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 NSMCE4AQ9NXX6 385 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 FAM8A1Q9UBU6 413 aa16.66■□□□□ 0.26
PRPF40A-204ENST00000450303 ERVH48-1M5A8F1 160 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 UBXN7O94888 489 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 XIAPP98170 497 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 GPR18Q14330 331 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 AGAP9Q5VTM2 703 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 NEPROQ6NW34 567 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 LRIG3Q6UXM1 1119 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 WASH2PQ6VEQ5 465 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 BMPERQ8N8U9 685 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 FBF1Q8TES7 1133 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 SNRNP27Q8WVK2 155 aaKnown RBP16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 RNF31Q96EP0 1072 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 TGM7Q96PF1 710 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 TRIM56Q9BRZ2 755 aaKnown RBP16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 UCK1Q9HA47 277 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 APMAPQ9HDC9 416 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 SLC40A1Q9NP59 571 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 WASH6PQ9NQA3 447 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 SMOXQ9NWM0 555 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 MOCS1Q9NZB8 636 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 CRLS1Q9UJA2 301 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 PCDHGA3Q9Y5H0 932 aa16.65■□□□□ 0.26
PRPF40A-204ENST00000450303 TCRBV9S1A1TA0A576 114 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 B4E171 279 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 STMND1H3BQB6 276 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 CD3EAPO15446 510 aaKnown RBP16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 C1QL1O75973 258 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 WT1P19544 449 aaPredicted RBP16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 CD82P27701 267 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 TSPAN7P41732 249 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 HALP42357 657 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 LEPRP48357 1165 aaKnown RBP16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 ARCN1P48444 511 aaKnown RBP16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 ILF2Q12905 390 aaKnown RBP16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 NAB1Q13506 487 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 LY6DQ14210 128 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 SLC29A2Q14542 456 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 KLHL38Q2WGJ6 581 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 DCAF12Q5T6F0 453 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 CERS6Q6ZMG9 384 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 TAS2R42Q7RTR8 314 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 PLXDC1Q8IUK5 500 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 GPR150Q8NGU9 434 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 FAM76AQ8TAV0 307 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 TTC9Q92623 222 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 RSC1A1Q92681 617 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 CYTH2Q99418 400 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 B3GNT4Q9C0J1 378 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 EPB41L1Q9H4G0 881 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 IARS2Q9NSE4 1012 aaKnown RBP16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 POT1Q9NUX5 634 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 ZFATQ9P243 1243 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 TXNDC16Q9P2K2 825 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 VPS9D1Q9Y2B5 631 aa16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 CFAP20Q9Y6A4 193 aaKnown RBP16.64■□□□□ 0.25
PRPF40A-204ENST00000450303 CAPN5O15484 640 aaPredicted RBP16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 KIF1CO43896 1103 aaKnown RBP16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 KCNJ13O60928 360 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 ERVK-10P10266 1014 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 OGNP20774 298 aaKnown RBP16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 FOXN2P32314 431 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 HSD17B3P37058 310 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 TTPAP49638 278 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 SEPHS1P49903 392 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms