RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 HPS4Q9NQG7 708 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 COQ6Q9Y2Z9 468 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 CCL27Q9Y4X3 112 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 NEUROG3Q9Y4Z2 214 aa14.5□□□□□ -0.09
SF1-211ENST00000448404 OBSL1O75147 1896 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 RNF103-CHMP3A0A140T963 221 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 ABHD14A-ACY1A0A1B0GW23 586 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 EI24O14681 340 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 ANKRD28O15084 1053 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 PFDN1O60925 122 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 MOSPD3O75425 235 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 CLPTM1O96005 669 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 GLUD1P00367 558 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 HSPA8P11142 646 aaKnown RBP14.49□□□□□ -0.09
SF1-211ENST00000448404 IMPDH2P12268 514 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 PRKG2Q13237 762 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 PCBP2Q15366 365 aaKnown RBP eCLIP14.49□□□□□ -0.098e-7■■■□□ 18.7
SF1-211ENST00000448404 ARSIQ5FYB1 569 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 LILRA6Q6PI73 481 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 C12orf76Q8N812 135 aaPredicted RBP14.49□□□□□ -0.09
SF1-211ENST00000448404 OR2A12Q8NGT7 310 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 ULK4Q96C45 1275 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 SCRN2Q96FV2 425 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 COPS8Q99627 209 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 P2RY13Q9BPV8 354 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 HOPXQ9BPY8 73 aaPredicted RBP14.49□□□□□ -0.09
SF1-211ENST00000448404 EBPLQ9BY08 206 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 BRINP2Q9C0B6 783 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 SMOXQ9NWM0 555 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 GID8Q9NWU2 228 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 SLC22A14Q9Y267 594 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 PCDHB1Q9Y5F3 818 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 ST14Q9Y5Y6 855 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 BBIP1A8MTZ0 92 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 AREL1O15033 823 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 LEFTY1O75610 366 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 DGKAP23743 735 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 NFKBIAP25963 317 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 RGS4P49798 205 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 ADARP55265 1226 aaKnown RBP14.49□□□□□ -0.09
SF1-211ENST00000448404 SNRPD1P62314 119 aaKnown RBP14.49□□□□□ -0.09
SF1-211ENST00000448404 SLC7A9P82251 487 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 TRAP1Q12931 704 aaKnown RBP14.49□□□□□ -0.09
SF1-211ENST00000448404 LSAMPQ13449 338 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 NEK5Q6P3R8 708 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 HACD2Q6Y1H2 254 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 CERS6Q6ZMG9 384 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 ERMP1Q7Z2K6 904 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 SPATA19Q7Z5L4 167 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 ZFAND4Q86XD8 727 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 CHERPQ8IWX8 916 aaKnown RBP14.49□□□□□ -0.09
SF1-211ENST00000448404 FAM217AQ8IXS0 508 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 ZNF513Q8N8E2 541 aaPredicted RBP14.49□□□□□ -0.09
SF1-211ENST00000448404 OR10A6Q8NH74 314 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 FBXO30Q8TB52 745 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 CYGBQ8WWM9 190 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 FIG4Q92562 907 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 BIRC7Q96CA5 298 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 VPS50Q96JG6 964 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 LMLNQ96KR4 655 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 ACTR8Q9H981 624 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 CCM2LQ9NUG4 571 aaPredicted RBP14.49□□□□□ -0.09
SF1-211ENST00000448404 RIC8BQ9NVN3 520 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 ATG2BQ96BY7 2078 aa14.49□□□□□ -0.09
SF1-211ENST00000448404 TRBV5-4A0A0C4DH59 114 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 EEDO75530 441 aaKnown RBP14.48□□□□□ -0.09
SF1-211ENST00000448404 CTSLP07711 333 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 FAM58BPP0C7Q3 252 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 PHC1P78364 1004 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 ABRQ12979 859 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 TSTA3Q13630 321 aaPredicted RBP14.48□□□□□ -0.09
SF1-211ENST00000448404 PLCL1Q15111 1095 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 ANKRD26P1Q6NSI1 321 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 TPRG1Q6ZUI0 275 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 UBE2R2Q712K3 238 aaPredicted RBP14.48□□□□□ -0.09
SF1-211ENST00000448404 GRASPQ7Z6J2 395 aaPredicted RBP14.48□□□□□ -0.09
SF1-211ENST00000448404 ADIPOR2Q86V24 386 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 PDPRQ8NCN5 879 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 TOX2Q96NM4 488 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 WRAP53Q9BUR4 548 aaKnown RBP14.48□□□□□ -0.09
SF1-211ENST00000448404 NUSAP1Q9BXS6 441 aaKnown RBP14.48□□□□□ -0.09
SF1-211ENST00000448404 RAB26Q9ULW5 256 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 VPS4AQ9UN37 437 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 OARD1Q9Y530 152 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 ULK1O75385 1050 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 STAMBPO95630 424 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 OTCP00480 354 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 PDYNP01213 254 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 PPP3CCP48454 512 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 GRIN2CQ14957 1233 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 IMPG1Q17R60 797 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 PTCHD3Q3KNS1 767 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 MAGEE2Q8TD90 523 aaPredicted RBP14.48□□□□□ -0.09
SF1-211ENST00000448404 NCSTNQ92542 709 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 ZNF597Q96LX8 424 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 THUMPD3Q9BV44 507 aaKnown RBP14.48□□□□□ -0.09
SF1-211ENST00000448404 ACPTQ9BZG2 426 aa14.48□□□□□ -0.09
SF1-211ENST00000448404 LEF1Q9UJU2 399 aaPredicted RBP14.48□□□□□ -0.09
SF1-211ENST00000448404 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.47□□□□□ -0.09
SF1-211ENST00000448404 FAM234BA2RU67 622 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms