RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 ERVK-6Q9BXR3 956 aa7.66□□□□□ -1.18
NEDD9-204ENST00000448183 TMLHEQ9NVH6 421 aa7.66□□□□□ -1.18
NEDD9-204ENST00000448183 CFAP97Q9P2B7 532 aa7.66□□□□□ -1.18
NEDD9-204ENST00000448183 FBXW11Q9UKB1 542 aa7.66□□□□□ -1.18
NEDD9-204ENST00000448183 PDLIM1O00151 329 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 CHP2O43745 196 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 OR4Q2P0C623 313 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 IDSP22304 550 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 IGFALSP35858 605 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 DNASE1L1P49184 302 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 ADAM8P78325 824 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 SCRN3Q0VDG4 424 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 CBLBQ13191 982 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 PDE12Q6L8Q7 609 aaKnown RBP7.65□□□□□ -1.18
NEDD9-204ENST00000448183 DNAJB7Q7Z6W7 309 aaPredicted RBP7.65□□□□□ -1.18
NEDD9-204ENST00000448183 PHYKPLQ8IUZ5 450 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 TMEM192Q8IY95 271 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 OR8H3Q8N146 312 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 SIDT2Q8NBJ9 832 aaKnown RBP7.65□□□□□ -1.18
NEDD9-204ENST00000448183 OR10H4Q8NGA5 316 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 OR10G2Q8NGC3 310 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 OR4C6Q8NH72 309 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 STON2Q8WXE9 905 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 TMEM209Q96SK2 561 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 CST11Q9H112 138 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 HIPK3Q9H422 1215 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 FKBP14Q9NWM8 211 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 TMEM9Q9P0T7 183 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 PTBP2Q9UKA9 531 aaKnown RBP7.65□□□□□ -1.18
NEDD9-204ENST00000448183 ZNF536O15090 1300 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 OR2AG2A6NM03 316 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 ITM2AO43736 263 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 PAPSS2O95340 614 aaPredicted RBP7.65□□□□□ -1.18
NEDD9-204ENST00000448183 APOC1P02654 83 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 CD2P06729 351 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 YES1P07947 543 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 GNAZP19086 355 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 NT5EP21589 574 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 CSTF2P33240 577 aaKnown RBP eCLIP7.65□□□□□ -1.181e-7■■■□□ 19
NEDD9-204ENST00000448183 HSPB3Q12988 150 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 IDNKQ5T6J7 187 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 LINGO4Q6UY18 593 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 DEFB132Q7Z7B7 95 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 GPALPP1Q8IXQ4 340 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 C2orf73Q8N5S3 287 aaPredicted RBP7.65□□□□□ -1.18
NEDD9-204ENST00000448183 CMASQ8NFW8 434 aaPredicted RBP7.65□□□□□ -1.18
NEDD9-204ENST00000448183 EFHD2Q96C19 240 aaPredicted RBP7.65□□□□□ -1.18
NEDD9-204ENST00000448183 OR52B2Q96RD2 323 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 FCRL5Q96RD9 977 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 MYOCQ99972 504 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 ACBD6Q9BR61 282 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 EIF3KQ9UBQ5 218 aaKnown RBP7.65□□□□□ -1.18
NEDD9-204ENST00000448183 SPEF1Q9Y4P9 236 aa7.65□□□□□ -1.18
NEDD9-204ENST00000448183 SPIN1Q9Y657 262 aaPredicted RBP7.65□□□□□ -1.18
NEDD9-204ENST00000448183 NEDD8-MDP1E9PL57 170 aa7.65□□□□□ -1.19
NEDD9-204ENST00000448183 K7EPI3 171 aa7.65□□□□□ -1.19
NEDD9-204ENST00000448183 TSPAN1O60635 241 aa7.65□□□□□ -1.19
NEDD9-204ENST00000448183 MYCLP1P12525 358 aaPredicted RBP7.65□□□□□ -1.19
NEDD9-204ENST00000448183 DNAJA1P31689 397 aaKnown RBP7.65□□□□□ -1.19
NEDD9-204ENST00000448183 IST1P53990 364 aa7.65□□□□□ -1.19
NEDD9-204ENST00000448183 TSPAN5P62079 268 aa7.65□□□□□ -1.19
NEDD9-204ENST00000448183 IRF9Q00978 393 aa7.65□□□□□ -1.19
NEDD9-204ENST00000448183 RHDQ02161 417 aa7.65□□□□□ -1.19
NEDD9-204ENST00000448183 TARDBPQ13148 414 aaKnown RBP eCLIP7.65□□□□□ -1.19
NEDD9-204ENST00000448183 DSC3Q14574 896 aa7.65□□□□□ -1.19
NEDD9-204ENST00000448183 WSCD2Q2TBF2 565 aa7.65□□□□□ -1.19
NEDD9-204ENST00000448183 CLIP4Q8N3C7 705 aa7.65□□□□□ -1.19
NEDD9-204ENST00000448183 POF1BQ8WVV4 589 aa7.65□□□□□ -1.19
NEDD9-204ENST00000448183 C17orf50Q8WW18 174 aa7.65□□□□□ -1.19
NEDD9-204ENST00000448183 CRELD1Q96HD1 420 aa7.65□□□□□ -1.19
NEDD9-204ENST00000448183 CGREF1Q99674 301 aa7.65□□□□□ -1.19
NEDD9-204ENST00000448183 OR51V1Q9H2C8 321 aa7.65□□□□□ -1.19
NEDD9-204ENST00000448183 TOR3AQ9H497 397 aa7.65□□□□□ -1.19
NEDD9-204ENST00000448183 DNAAF2Q9NVR5 837 aaKnown RBP7.65□□□□□ -1.19
NEDD9-204ENST00000448183 LRRC42Q9Y546 428 aa7.65□□□□□ -1.19
NEDD9-204ENST00000448183 ANXA2P2A6NMY6 339 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 NT5C1B-RDH14C9J2C7 533 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 PDCD5O14737 125 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 RBMXL2O75526 392 aaKnown RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 STBD1O95210 358 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 ADH1CP00326 375 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 ANXA2P07355 339 aaKnown RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 PEPDP12955 493 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 ITIH1P19827 911 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 EFNA1P20827 205 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 NSG1P42857 185 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 SLC15A1P46059 708 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 ZNF155Q12901 538 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 TAF1AQ15573 450 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 FBXO43Q4G163 708 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 CPNE8Q86YQ8 564 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 PSMG2Q969U7 264 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 PCED1BQ96HM7 432 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 SLC35G5Q96KT7 338 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 KCTD7Q96MP8 289 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 NTPCRQ9BSD7 190 aaKnown RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 COMMD4Q9H0A8 199 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 TCF7L1Q9HCS4 588 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 MLXQ9UH92 298 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 WDR37Q9Y2I8 494 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms