RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 TMEM71Q6P5X7 295 aa12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 ZC3HC1Q86WB0 502 aaKnown RBP12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 OOSP2Q86WS3 158 aa12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 VRK3Q8IV63 474 aa12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 SIDT2Q8NBJ9 832 aaKnown RBP12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 PHC3Q8NDX5 983 aa12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 OR4D9Q8NGE8 314 aa12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 CFAP61Q8NHU2 1237 aa12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 LCN9Q8WX39 176 aa12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 UBXN4Q92575 508 aa12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 ATXN7L3BQ96GX2 97 aa12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 VPS39Q96JC1 886 aa12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 CYTH2Q99418 400 aa12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 HGH1Q9BTY7 390 aa12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 RHOJQ9H4E5 214 aa12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 NINJ2Q9NZG7 142 aa12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 AKAP7Q9P0M2 348 aaPredicted RBP12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 VWA7Q9Y334 891 aa12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 PSAT1Q9Y617 370 aa12.74□□□□□ -0.37
ERGIC3-209ENST00000447986 PRAMEF33A0A0G2JMD5 474 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 FAM149AA5PLN7 773 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 FAM221BA6H8Z2 402 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 POM121CA8CG34 1229 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 TYRP1P17643 537 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 SPRP35270 261 aaPredicted RBP12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 CCNFP41002 786 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 CAPZBP47756 277 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 CLDN6P56747 220 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 SHC2P98077 582 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 PRKAA1Q13131 559 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 PRKG2Q13237 762 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 GBX1Q14549 363 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 KLHL38Q2WGJ6 581 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 GRTP1Q5TC63 336 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 NEK10Q6ZWH5 1172 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 TRMT10CQ7L0Y3 403 aaKnown RBP12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 DCUN1D3Q8IWE4 304 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 RAB42Q8N4Z0 105 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 PPM1NQ8N819 430 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 OR5AR1Q8NGP9 310 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 CD200R1Q8TD46 325 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 ZDHHC12Q96GR4 267 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 ELMO2Q96JJ3 720 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 NUDT22Q9BRQ3 303 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 SRMSQ9H3Y6 488 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 TFB2MQ9H5Q4 396 aaKnown RBP12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 KLK13Q9UKR3 277 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 LHX6Q9UPM6 363 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 TDRKHQ9Y2W6 561 aaKnown RBP12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 MED16Q9Y2X0 877 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 MSRB2Q9Y3D2 182 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 GOLGA4Q13439 2230 aaKnown RBP12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 FAM95CA0A1B0GW59 222 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 MATN2O00339 956 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 ACSL3O95573 720 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 TOP3BO95985 862 aaKnown RBP12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 SAT1P21673 171 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 MCM3P25205 808 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 TNFRSF8P28908 595 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 CCKBRP32239 447 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 SHMT2P34897 504 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 ABCG1P45844 678 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 TRA2AQ13595 282 aaKnown RBP eCLIP12.73□□□□□ -0.372e-9■■■□□ 19.1
ERGIC3-209ENST00000447986 ACSBG2Q5FVE4 666 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 RBM20Q5T481 1227 aaKnown RBP12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 PHF19Q5T6S3 580 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 OR52E1Q8NGJ3 308 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 RAD51AP1Q96B01 352 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 TSPAN17Q96FV3 270 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 RBBP8Q99708 897 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 RAB33BQ9H082 229 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 SMYD2Q9NRG4 433 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 GALPQ9UBC7 116 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 WASF3Q9UPY6 502 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 IKBKGQ9Y6K9 419 aa12.73□□□□□ -0.37
ERGIC3-209ENST00000447986 CNOT1A5YKK6 2376 aaKnown RBP12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 PIKFYVEQ9Y2I7 2098 aa12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 A0A087WUV0 522 aaPredicted RBP12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 CXorf49A8MYA2 514 aaPredicted RBP12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 PIAS1O75925 651 aa12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 CATP04040 527 aaKnown RBP12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 MPC1LP0DKB6 136 aa12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 SPINK2P20155 84 aa12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 LIMK2P53671 638 aa12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 IL2P60568 153 aa12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 POU4F1Q01851 419 aa12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 EIF3IQ13347 325 aaKnown RBP12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 CCNI2Q6ZMN8 369 aaPredicted RBP12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 AMIGO1Q86WK6 493 aa12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 CPNE9Q8IYJ1 553 aa12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 MYO1HQ8N1T3 1032 aa12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 OR4E2Q8NGC2 313 aa12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 GIMAP7Q8NHV1 300 aa12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 RSC1A1Q92681 617 aa12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 LIN37Q96GY3 246 aaPredicted RBP12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 CMKLR1Q99788 373 aa12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 RAB11FIP5Q9BXF6 653 aa12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 ACSS3Q9H6R3 686 aa12.72□□□□□ -0.37
ERGIC3-209ENST00000447986 SYTL2Q9HCH5 934 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms