RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 LINGO1Q96FE5 620 aa11.31□□□□□ -0.6
LINC00408-201ENST00000447784 RUFY1Q96T51 708 aa11.31□□□□□ -0.6
LINC00408-201ENST00000447784 INSM2Q96T92 566 aaPredicted RBP11.31□□□□□ -0.6
LINC00408-201ENST00000447784 SLC38A3Q99624 504 aa11.31□□□□□ -0.6
LINC00408-201ENST00000447784 MCMBPQ9BTE3 642 aa11.31□□□□□ -0.6
LINC00408-201ENST00000447784 DHRS4Q9BTZ2 278 aa11.31□□□□□ -0.6
LINC00408-201ENST00000447784 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.31□□□□□ -0.6
LINC00408-201ENST00000447784 VPS11Q9H270 941 aa11.31□□□□□ -0.6
LINC00408-201ENST00000447784 OR52A5Q9H2C5 316 aa11.31□□□□□ -0.6
LINC00408-201ENST00000447784 TRIT1Q9H3H1 467 aaKnown RBP11.31□□□□□ -0.6
LINC00408-201ENST00000447784 MVB12BQ9H7P6 319 aa11.31□□□□□ -0.6
LINC00408-201ENST00000447784 POT1Q9NUX5 634 aa11.31□□□□□ -0.6
LINC00408-201ENST00000447784 GALPQ9UBC7 116 aa11.31□□□□□ -0.6
LINC00408-201ENST00000447784 CPNE7Q9UBL6 633 aa11.31□□□□□ -0.6
LINC00408-201ENST00000447784 TBK1Q9UHD2 729 aa11.31□□□□□ -0.6
LINC00408-201ENST00000447784 WDR37Q9Y2I8 494 aa11.31□□□□□ -0.6
LINC00408-201ENST00000447784 MED16Q9Y2X0 877 aa11.31□□□□□ -0.6
LINC00408-201ENST00000447784 ACOT9Q9Y305 439 aa11.31□□□□□ -0.6
LINC00408-201ENST00000447784 A0A087X1B8 175 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 LY6G6EA0A0G2JKS1 128 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 PHGDHO43175 533 aaKnown RBP11.3□□□□□ -0.6
LINC00408-201ENST00000447784 NOBOXO60393 691 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 EML2O95834 649 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 CATP04040 527 aaKnown RBP11.3□□□□□ -0.6
LINC00408-201ENST00000447784 CAPNS1P04632 268 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 MPOP05164 745 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 MPC1LP0DKB6 136 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 BRAFP15056 766 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 CCNFP41002 786 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 MAZP56270 477 aaKnown RBP11.3□□□□□ -0.6
LINC00408-201ENST00000447784 HHEXQ03014 270 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 CAMK2BQ13554 666 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 RASA2Q15283 850 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 KRT71Q3SY84 523 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 CAPRIN2Q6IMN6 1127 aaKnown RBP11.3□□□□□ -0.6
LINC00408-201ENST00000447784 UNC5DQ6UXZ4 953 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 HDXQ7Z353 690 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 TDRPQ86YL5 185 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 VRK3Q8IV63 474 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 CEP97Q8IW35 865 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 SLC35F3Q8IY50 421 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 NAGSQ8N159 534 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 RIBC1Q8N443 379 aaPredicted RBP11.3□□□□□ -0.6
LINC00408-201ENST00000447784 RAB42Q8N4Z0 105 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 PHC3Q8NDX5 983 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 GPR156Q8NFN8 814 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 GIMAP7Q8NHV1 300 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 EPS8L3Q8TE67 593 aaKnown RBP11.3□□□□□ -0.6
LINC00408-201ENST00000447784 SLC37A2Q8TED4 501 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 EEF1AKMT1Q8WVE0 214 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 ZFPM2Q8WW38 1151 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 PATE1Q8WXA2 126 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 CABS1Q96KC9 395 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 RMDN2Q96LZ7 410 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 SLC30A3Q99726 388 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 TRIM54Q9BYV2 358 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 SNX15Q9NRS6 342 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 SCHIP1Q9P0W5 487 aaPredicted RBP11.3□□□□□ -0.6
LINC00408-201ENST00000447784 LRIT1Q9P2V4 623 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 DKK4Q9UBT3 224 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 POLG2Q9UHN1 485 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 CDYLQ9Y232 598 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 CFAP20Q9Y6A4 193 aaKnown RBP11.3□□□□□ -0.6
LINC00408-201ENST00000447784 U3KQA8 63 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 TRPM6Q9BX84 2022 aa11.3□□□□□ -0.6
LINC00408-201ENST00000447784 TMEM131Q92545 1883 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 A0A096LPK6 155 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 EME2A4GXA9 379 aaPredicted RBP11.29□□□□□ -0.6
LINC00408-201ENST00000447784 GOLGA6L10A6NI86 522 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 NUDT21O43809 227 aaKnown RBP11.29□□□□□ -0.6
LINC00408-201ENST00000447784 ZBTB14O43829 449 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 C8GP07360 202 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 HIST1H2AGP0C0S8 130 aaPredicted RBP11.29□□□□□ -0.6
LINC00408-201ENST00000447784 CCDC166P0CW27 439 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 JUPP14923 745 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 GLB1P16278 677 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 ZNF37AP17032 561 aaPredicted RBP11.29□□□□□ -0.6
LINC00408-201ENST00000447784 HIST1H2ADP20671 130 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 ACADLP28330 430 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 SLC26A3P40879 764 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 SLC19A1P41440 591 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 ATP6V0D1P61421 351 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 TIAL1Q01085 375 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC00408-201ENST00000447784 INSM1Q01101 510 aaPredicted RBP11.29□□□□□ -0.6
LINC00408-201ENST00000447784 ZNF460Q14592 562 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 CASP8Q14790 479 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 PLCL1Q15111 1095 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 ZKSCAN8Q15776 578 aaPredicted RBP11.29□□□□□ -0.6
LINC00408-201ENST00000447784 CEP85LQ5SZL2 805 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 HES3Q5TGS1 186 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 KLC3Q6P597 504 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 LRIG3Q6UXM1 1119 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 PIWIL4Q7Z3Z4 852 aaKnown RBP11.29□□□□□ -0.6
LINC00408-201ENST00000447784 CMC1Q7Z7K0 106 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 TBC1D21Q8IYX1 336 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 HIST1H2AHQ96KK5 128 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 HIST1H2AJQ99878 128 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 H2AFJQ9BTM1 129 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 TMEM109Q9BVC6 243 aa11.29□□□□□ -0.6
LINC00408-201ENST00000447784 ABCG4Q9H172 646 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms