RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 DPP3Q9NY33 737 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 FLRT1Q9NZU1 646 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 NME7Q9Y5B8 376 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 COL1A2P08123 1366 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 FAM25EA8MYX2 175 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 M0QYV0 167 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 CST1P01037 141 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 ICAM2P13598 275 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 SPRYD7Q5W111 196 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 SPATA19Q7Z5L4 167 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 PHYKPLQ8IUZ5 450 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 ZNF567Q8N184 647 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 FNDC5Q8NAU1 212 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 ZNF540Q8NDQ6 660 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 NEDD4LQ96PU5 975 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 SCPEP1Q9HB40 452 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 GBA2Q9HCG7 927 aaPredicted RBP18.85■□□□□ 0.61
HMGA1-205ENST00000447654 ASAH2Q9NR71 780 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 PCDHB14Q9Y5E9 798 aa18.85■□□□□ 0.61
HMGA1-205ENST00000447654 FAM95CA0A1B0GW59 222 aa18.84■□□□□ 0.61
HMGA1-205ENST00000447654 CCDC182A6NF36 153 aa18.84■□□□□ 0.61
HMGA1-205ENST00000447654 HS6ST1O60243 411 aa18.84■□□□□ 0.61
HMGA1-205ENST00000447654 FOSL1P15407 271 aa18.84■□□□□ 0.61
HMGA1-205ENST00000447654 AVPR1AP37288 418 aa18.84■□□□□ 0.61
HMGA1-205ENST00000447654 LIMK1P53667 647 aa18.84■□□□□ 0.61
HMGA1-205ENST00000447654 RAPSNQ13702 412 aa18.84■□□□□ 0.61
HMGA1-205ENST00000447654 LEXMQ3ZCV2 418 aa18.84■□□□□ 0.61
HMGA1-205ENST00000447654 AGAP9Q5VTM2 703 aa18.84■□□□□ 0.61
HMGA1-205ENST00000447654 KIAA0319Q5VV43 1072 aa18.84■□□□□ 0.61
HMGA1-205ENST00000447654 PLEKHH3Q7Z736 793 aa18.84■□□□□ 0.61
HMGA1-205ENST00000447654 KIF18BQ86Y91 864 aa18.84■□□□□ 0.61
HMGA1-205ENST00000447654 VWA5B2Q8N398 1253 aa18.84■□□□□ 0.61
HMGA1-205ENST00000447654 ISG20Q96AZ6 181 aaKnown RBP18.84■□□□□ 0.61
HMGA1-205ENST00000447654 ABHD16BQ9H3Z7 469 aa18.84■□□□□ 0.61
HMGA1-205ENST00000447654 GPBP1L1Q9HC44 474 aaPredicted RBP18.84■□□□□ 0.61
HMGA1-205ENST00000447654 NDFIP2Q9NV92 336 aa18.84■□□□□ 0.61
HMGA1-205ENST00000447654 UCKL1Q9NWZ5 548 aa18.84■□□□□ 0.61
HMGA1-205ENST00000447654 NUFIP1Q9UHK0 495 aaKnown RBP18.84■□□□□ 0.61
HMGA1-205ENST00000447654 TOR1AO14656 332 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 NOBOXO60393 691 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 GGT1P19440 569 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 SAT1P21673 171 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 CBLP22681 906 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 POU4F1Q01851 419 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 ASAH1Q13510 395 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 ANGPT1Q15389 498 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 ZBTB37Q5TC79 503 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 TIGD7Q6NT04 549 aaPredicted RBP18.83■□□□□ 0.61
HMGA1-205ENST00000447654 SLC46A3Q7Z3Q1 461 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 NT5DC4Q86YG4 428 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 OR8H2Q8N162 312 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 C2orf69Q8N8R5 385 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 DNAAF3Q8N9W5 541 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 MYO18AQ92614 2054 aaKnown RBP18.83■□□□□ 0.61
HMGA1-205ENST00000447654 NRCAMQ92823 1304 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 C3orf30Q96M34 536 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 TTLL2Q9BWV7 592 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 DYRK4Q9NR20 520 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 CPA4Q9UI42 421 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 USP3Q9Y6I4 520 aa18.83■□□□□ 0.61
HMGA1-205ENST00000447654 GPR32O75388 356 aa18.83■□□□□ 0.6
HMGA1-205ENST00000447654 AHSGP02765 367 aa18.83■□□□□ 0.6
HMGA1-205ENST00000447654 TGFBR1P36897 503 aa18.83■□□□□ 0.6
HMGA1-205ENST00000447654 OR4D2P58180 307 aa18.83■□□□□ 0.6
HMGA1-205ENST00000447654 YBX1P67809 324 aaKnown RBP18.83■□□□□ 0.6
HMGA1-205ENST00000447654 TBCEQ15813 527 aaPredicted RBP18.83■□□□□ 0.6
HMGA1-205ENST00000447654 NECAB2Q7Z6G3 386 aa18.83■□□□□ 0.6
HMGA1-205ENST00000447654 KIF12Q96FN5 646 aa18.83■□□□□ 0.6
HMGA1-205ENST00000447654 RPL10LQ96L21 214 aaKnown RBP18.83■□□□□ 0.6
HMGA1-205ENST00000447654 LGMNQ99538 433 aa18.83■□□□□ 0.6
HMGA1-205ENST00000447654 PPA2Q9H2U2 334 aa18.83■□□□□ 0.6
HMGA1-205ENST00000447654 FAM83DQ9H4H8 585 aa18.83■□□□□ 0.6
HMGA1-205ENST00000447654 LTB4R2Q9NPC1 389 aa18.83■□□□□ 0.6
HMGA1-205ENST00000447654 ZC4H2Q9NQZ6 224 aa18.83■□□□□ 0.6
HMGA1-205ENST00000447654 IGSF5Q9NSI5 407 aa18.83■□□□□ 0.6
HMGA1-205ENST00000447654 SMPD4Q9NXE4 827 aa18.83■□□□□ 0.6
HMGA1-205ENST00000447654 TMEFF2Q9UIK5 374 aaPredicted RBP18.83■□□□□ 0.6
HMGA1-205ENST00000447654 TRIP12Q14669 1992 aaPredicted RBP18.82■□□□□ 0.6
HMGA1-205ENST00000447654 PRR23AA6NEV1 266 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 GNGT2O14610 69 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 CELF2O95319 508 aaKnown RBP18.82■□□□□ 0.6
HMGA1-205ENST00000447654 FMO3P31513 532 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 MGAT3Q09327 533 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 RIN1Q13671 783 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 FAM110CQ1W6H9 321 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 DPP10Q8N608 796 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 TTLQ8NG68 377 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 FRMD6Q96NE9 622 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 LPIN3Q9BQK8 851 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 GABARAPL1Q9H0R8 117 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 WDR70Q9NW82 654 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 NOSIPQ9Y314 301 aaKnown RBP18.82■□□□□ 0.6
HMGA1-205ENST00000447654 GPR45Q9Y5Y3 372 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 F5H423 210 aaPredicted RBP18.82■□□□□ 0.6
HMGA1-205ENST00000447654 CA12O43570 354 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 HCRTO43612 131 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 FAM20BO75063 409 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 ATP6AP2O75787 350 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 PFKMP08237 780 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 RPL17P18621 184 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms