RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 KRT87PA6NCN2 255 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 OR5K3A6NET4 321 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 EFCAB7A8K855 629 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 KPNA5O15131 536 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 GPC4O75487 556 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 PIAS1O75925 651 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 CCL4P13236 92 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 POLR2CP19387 275 aaPredicted RBP11.59□□□□□ -0.55
RFC4-208ENST00000447345 SSTR1P30872 391 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 CSTF2P33240 577 aaKnown RBP eCLIP11.59□□□□□ -0.55
RFC4-208ENST00000447345 BDKRB1P46663 353 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 ADARP55265 1226 aaKnown RBP11.59□□□□□ -0.55
RFC4-208ENST00000447345 PLOD1Q02809 727 aaPredicted RBP11.59□□□□□ -0.55
RFC4-208ENST00000447345 CAV1Q03135 178 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 EIF3IQ13347 325 aaKnown RBP11.59□□□□□ -0.55
RFC4-208ENST00000447345 SQSTM1Q13501 440 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 ACSBG2Q5FVE4 666 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 RBM20Q5T481 1227 aaKnown RBP11.59□□□□□ -0.55
RFC4-208ENST00000447345 ARMC6Q6NXE6 501 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 KLHL35Q6PF15 583 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 PALM2Q8IXS6 379 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 CEP112Q8N8E3 955 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 GIMAP7Q8NHV1 300 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 GABPB2Q8TAK5 448 aaPredicted RBP11.59□□□□□ -0.55
RFC4-208ENST00000447345 PMEPA1Q969W9 287 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 RNF31Q96EP0 1072 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 PRR11Q96HE9 360 aaPredicted RBP11.59□□□□□ -0.55
RFC4-208ENST00000447345 C9orf72Q96LT7 481 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 DCBLD2Q96PD2 775 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 GPR21Q99679 349 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 SLC30A3Q99726 388 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 SRMSQ9H3Y6 488 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 HRASLS2Q9NWW9 162 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 ZFATQ9P243 1243 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 DMGDHQ9UI17 866 aaKnown RBP11.59□□□□□ -0.55
RFC4-208ENST00000447345 ZMIZ1Q9ULJ6 1067 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 ICKQ9UPZ9 632 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 RAXQ9Y2V3 346 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 PCDHGA8Q9Y5G5 932 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 NFS1Q9Y697 457 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 DMXL2Q8TDJ6 3036 aa11.59□□□□□ -0.55
RFC4-208ENST00000447345 EPG5Q9HCE0 2579 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 TMEM8BA6NDV4 472 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 BTN3A1O00481 513 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 HGSO14964 777 aaPredicted RBP11.58□□□□□ -0.56
RFC4-208ENST00000447345 EIF3HO15372 352 aaKnown RBP eCLIP11.58□□□□□ -0.56
RFC4-208ENST00000447345 TLX3O43711 291 aaPredicted RBP11.58□□□□□ -0.56
RFC4-208ENST00000447345 VPS26AO75436 327 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 SLCO2B1O94956 709 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 C9P02748 559 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 GABRB3P28472 473 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 CLCN7P51798 805 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 MGAT5Q09328 741 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 TRA2AQ13595 282 aaKnown RBP eCLIP11.58□□□□□ -0.56
RFC4-208ENST00000447345 TBC1D25Q3MII6 688 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 DNTTIP2Q5QJE6 756 aaKnown RBP11.58□□□□□ -0.56
RFC4-208ENST00000447345 PLEKHS1Q5SXH7 462 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 TEDDM1Q5T9Z0 273 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 CACHD1Q5VU97 1274 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 FBXO38Q6PIJ6 1188 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 TAX1BP1Q86VP1 789 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 CNTN4Q8IWV2 1026 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 CPNE9Q8IYJ1 553 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 TBC1D21Q8IYX1 336 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 GPATCH11Q8N954 259 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 LMNTD1Q8N9Z9 388 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 LRRN4CLQ8ND94 238 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 AGBL5Q8NDL9 886 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 OR5K2Q8NHB8 316 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 ZFPM2Q8WW38 1151 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 IFT81Q8WYA0 676 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 ZDHHC12Q96GR4 267 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 NAF1Q96HR8 494 aaKnown RBP11.58□□□□□ -0.56
RFC4-208ENST00000447345 PPM1MQ96MI6 270 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 AARSD1Q9BTE6 412 aaKnown RBP11.58□□□□□ -0.56
RFC4-208ENST00000447345 ASCL3Q9NQ33 180 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 WDR70Q9NW82 654 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 OCIAD1Q9NX40 245 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 MED16Q9Y2X0 877 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 PSAT1Q9Y617 370 aa11.58□□□□□ -0.56
RFC4-208ENST00000447345 TAF4O00268 1085 aa11.57□□□□□ -0.56
RFC4-208ENST00000447345 BTN3A3O00478 584 aa11.57□□□□□ -0.56
RFC4-208ENST00000447345 PRAMEF10O60809 474 aa11.57□□□□□ -0.56
RFC4-208ENST00000447345 AHSGP02765 367 aa11.57□□□□□ -0.56
RFC4-208ENST00000447345 CAPNS1P04632 268 aa11.57□□□□□ -0.56
RFC4-208ENST00000447345 RPN2P04844 631 aa11.57□□□□□ -0.56
RFC4-208ENST00000447345 ITGA2BP08514 1039 aa11.57□□□□□ -0.56
RFC4-208ENST00000447345 TPBGLP0DKB5 382 aa11.57□□□□□ -0.56
RFC4-208ENST00000447345 FGF3P11487 239 aaPredicted RBP11.57□□□□□ -0.56
RFC4-208ENST00000447345 SAT1P21673 171 aa11.57□□□□□ -0.56
RFC4-208ENST00000447345 MCM3P25205 808 aa11.57□□□□□ -0.56
RFC4-208ENST00000447345 KPNA2P52292 529 aaKnown RBP11.57□□□□□ -0.56
RFC4-208ENST00000447345 PGGT1BP53609 377 aa11.57□□□□□ -0.56
RFC4-208ENST00000447345 PRKAA1Q13131 559 aa11.57□□□□□ -0.56
RFC4-208ENST00000447345 KLHL38Q2WGJ6 581 aa11.57□□□□□ -0.56
RFC4-208ENST00000447345 TTLL9Q3SXZ7 439 aa11.57□□□□□ -0.56
RFC4-208ENST00000447345 CCSMST1Q4G0I0 132 aa11.57□□□□□ -0.56
RFC4-208ENST00000447345 UNC5DQ6UXZ4 953 aa11.57□□□□□ -0.56
RFC4-208ENST00000447345 KIAA0408Q6ZU52 694 aa11.57□□□□□ -0.56
RFC4-208ENST00000447345 ARHGAP22Q7Z5H3 698 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms