RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 CGNQ9P2M7 1197 aaKnown RBP3.15□□□□□ -1.9
PMS1-215ENST00000447232 C17orf113A0A1B0GUU1 675 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 SHOXO15266 292 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 INSIG1O15503 277 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 EPB41L2O43491 1005 aaKnown RBP3.15□□□□□ -1.91
PMS1-215ENST00000447232 PIGNO95427 931 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 VDRP11473 427 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 PRKCAP17252 672 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 THBS2P35442 1172 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 ACVRL1P37023 503 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 FOLR3P41439 243 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 YWHAZP63104 245 aaKnown RBP3.15□□□□□ -1.91
PMS1-215ENST00000447232 ARG2P78540 354 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 PMP22Q01453 160 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 DMTNQ08495 405 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 DAZAP2Q15038 168 aaPredicted RBP3.15□□□□□ -1.91
PMS1-215ENST00000447232 IRAK1BP1Q5VVH5 260 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 IRGCQ6NXR0 463 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 ARSKQ6UWY0 536 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 DPPA4Q7L190 304 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 FGD2Q7Z6J4 655 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 IGDCC3Q8IVU1 814 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 RASSF8Q8NHQ8 419 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 TFAP2BQ92481 460 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 PTERQ96BW5 349 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 CLIP3Q96DZ5 547 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 NUS1Q96E22 293 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 LCORQ96JN0 433 aaPredicted RBP3.15□□□□□ -1.91
PMS1-215ENST00000447232 PIP5K1AQ99755 562 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 CDADC1Q9BWV3 514 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 AMBRA1Q9C0C7 1298 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 AP5S1Q9NUS5 200 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 DDIT4Q9NX09 232 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 PRR13Q9NZ81 148 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 CBLCQ9ULV8 474 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 PTRH2Q9Y3E5 179 aaKnown RBP3.15□□□□□ -1.91
PMS1-215ENST00000447232 ASB1Q9Y576 335 aa3.15□□□□□ -1.91
PMS1-215ENST00000447232 EPPK1P58107 5090 aaKnown RBP3.15□□□□□ -1.91
PMS1-215ENST00000447232 PHF3Q92576 2039 aaKnown RBP3.15□□□□□ -1.91
PMS1-215ENST00000447232 DYTNA2CJ06 578 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 SLC9B1P1A6NJY1 282 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 TMCC1O94876 653 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 TSPAN12O95859 305 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 IGSF6O95976 241 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 MMP11P24347 488 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 ARL4AP40617 200 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 FOXL2P58012 376 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 DEFA6Q01524 100 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 LAPTM5Q13571 262 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 ANKRD1Q15327 319 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 CHRFAM7AQ494W8 412 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 UBAP2Q5T6F2 1119 aaKnown RBP3.14□□□□□ -1.91
PMS1-215ENST00000447232 DOK6Q6PKX4 331 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 CRTC3Q6UUV7 619 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 YTHDF3Q7Z739 585 aaKnown RBP3.14□□□□□ -1.91
PMS1-215ENST00000447232 C11orf96Q7Z7L8 435 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 GALNT13Q8IUC8 556 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 P3H2Q8IVL5 708 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 SIAH3Q8IW03 269 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 CCDC65Q8IXS2 484 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 FNIP1Q8TF40 1166 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 PSMF1Q92530 271 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 ECHDC3Q96DC8 303 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 EPSTI1Q96J88 318 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 ZNF641Q96N77 438 aaPredicted RBP3.14□□□□□ -1.91
PMS1-215ENST00000447232 SLC2A13Q96QE2 648 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 MAP3K3Q99759 626 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 C17orf62Q9BQA9 187 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 TRIM51Q9BSJ1 452 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 SIK2Q9H0K1 926 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 FAM204AQ9H8W3 233 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 ACTR5Q9H9F9 607 aaPredicted RBP3.14□□□□□ -1.91
PMS1-215ENST00000447232 KCTD5Q9NXV2 234 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 PLA2G3Q9NZ20 509 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 ZNF624Q9P2J8 865 aaPredicted RBP3.14□□□□□ -1.91
PMS1-215ENST00000447232 KIAA1257Q9ULG3 409 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 TMEM98Q9Y2Y6 226 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 SNX10Q9Y5X0 201 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 CCDC66A2RUB6 948 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 ZNHIT1O43257 154 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 LCA5LO95447 670 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 CD63P08962 238 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 MSL3P1P0C860 447 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 PVRP15151 417 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 ABOP16442 354 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 KIR2DL3P43628 341 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 CLCNKAP51800 687 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 DPTQ07507 201 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 PPP3CAQ08209 521 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 GRM3Q14832 879 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 ACOX1Q15067 660 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 TAF5Q15542 800 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 PDCD2Q16342 344 aaPredicted RBP3.14□□□□□ -1.91
PMS1-215ENST00000447232 VMACQ2NL98 169 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 CATSPEREQ5SY80 951 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 ZFYVE27Q5T4F4 411 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 ATG9BQ674R7 924 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 B4GALNT4Q76KP1 1039 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 MARK2Q7KZI7 788 aaKnown RBP3.14□□□□□ -1.91
PMS1-215ENST00000447232 NELFCDQ8IXH7 590 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms