RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-238ENST00000446312 INTS11Q5TA45 600 aaKnown RBP12.31□□□□□ -0.44
DDR1-238ENST00000446312 XAF1Q6GPH4 301 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 AHSA2Q719I0 299 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 LIX1Q8N485 282 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 PMEPA1Q969W9 287 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 ULK4Q96C45 1275 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 OMA1Q96E52 524 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 NRBF2Q96F24 287 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 TSGA13Q96PP4 275 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 INPP5KQ9BT40 448 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 POLR1EQ9GZS1 481 aaKnown RBP12.31□□□□□ -0.44
DDR1-238ENST00000446312 AIG1Q9NVV5 245 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 MTRRQ9UBK8 725 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 SARDHQ9UL12 918 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 MED16Q9Y2X0 877 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 SMIM30A4D0T7 59 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 KPNA4O00629 521 aaPredicted RBP12.31□□□□□ -0.44
DDR1-238ENST00000446312 TBX1O43435 398 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 CLPXO76031 633 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 DLGAP3O95886 979 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 PRKACAP17612 351 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 SGSHP51688 502 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 STC1P52823 247 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 SUZ12Q15022 739 aaKnown RBP12.31□□□□□ -0.44
DDR1-238ENST00000446312 MAPKAPK3Q16644 382 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 FAM214AQ32MH5 1076 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 COLEC12Q5KU26 742 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 CATSPEREQ5SY80 951 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 C9orf131Q5VYM1 1079 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 PTRHD1Q6GMV3 140 aaKnown RBP12.31□□□□□ -0.44
DDR1-238ENST00000446312 ZNF773Q6PK81 442 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 SPATC1Q76KD6 591 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.31□□□□□ -0.44
DDR1-238ENST00000446312 MFSD2AQ8NA29 543 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 NETO1Q8TDF5 533 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 EFHD2Q96C19 240 aaPredicted RBP12.31□□□□□ -0.44
DDR1-238ENST00000446312 TRMT13Q9NUP7 481 aaKnown RBP12.31□□□□□ -0.44
DDR1-238ENST00000446312 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.31□□□□□ -0.44
DDR1-238ENST00000446312 FAM118AQ9NWS6 357 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 VNN3Q9NY84 501 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 PSME2Q9UL46 239 aa12.31□□□□□ -0.44
DDR1-238ENST00000446312 K7ERQ8 282 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 CDK2AP1O14519 115 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 EIF2S1P05198 315 aaKnown RBP12.3□□□□□ -0.44
DDR1-238ENST00000446312 MBL2P11226 248 aaPredicted RBP12.3□□□□□ -0.44
DDR1-238ENST00000446312 COL6A1P12109 1028 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 HSD17B1P14061 328 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 GLULP15104 373 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 HLCSP50747 726 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 TRIM32Q13049 653 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 CBLBQ13191 982 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 C6orf141Q5SZD1 244 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 TTC23LQ6PF05 361 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 SLC22A16Q86VW1 577 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 MICU2Q8IYU8 434 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 UBE2J2Q8N2K1 259 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 OR7A2PQ8NGA2 310 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 ZUFSPQ96AP4 578 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 UHRF1Q96T88 793 aaPredicted RBP12.3□□□□□ -0.44
DDR1-238ENST00000446312 PTPN18Q99952 460 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 CINPQ9BW66 212 aaPredicted RBP12.3□□□□□ -0.44
DDR1-238ENST00000446312 PCTPQ9UKL6 214 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 SNX8Q9Y5X2 465 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 MTX2O75431 263 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 CRHBPP24387 322 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 DUSP4Q13115 394 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 CEP78Q5JTW2 689 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 IQSEC1Q6DN90 963 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 KIAA0408Q6ZU52 694 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 SPRED1Q7Z699 444 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 ELMOD2Q8IZ81 293 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 GALNT6Q8NCL4 622 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 CHDHQ8NE62 594 aaPredicted RBP12.3□□□□□ -0.44
DDR1-238ENST00000446312 L3HYPDHQ96EM0 354 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 MED30Q96HR3 178 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 OR52E6Q96RD3 313 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 NODALQ96S42 347 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 CRISPLD1Q9H336 500 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 TRIM39Q9HCM9 518 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 ABCD2Q9UBJ2 740 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 FCF1Q9Y324 198 aaKnown RBP12.3□□□□□ -0.44
DDR1-238ENST00000446312 PTCH2Q9Y6C5 1203 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 FGF10O15520 208 aaPredicted RBP12.3□□□□□ -0.44
DDR1-238ENST00000446312 VIPP01282 170 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 OPN1SWP03999 348 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 GPIP06744 558 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 DCKP27707 260 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 HOXD10P28358 340 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 IL2P60568 153 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 RCAN2Q14206 197 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 ZNF648Q5T619 568 aaPredicted RBP12.3□□□□□ -0.44
DDR1-238ENST00000446312 FAM171A1Q5VUB5 890 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 C8orf82Q6P1X6 216 aaPredicted RBP12.3□□□□□ -0.44
DDR1-238ENST00000446312 HID1Q8IV36 788 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 CADM3Q8N126 398 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 ZNF540Q8NDQ6 660 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 OR56A4Q8NGH8 313 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 OR13F1Q8NGS4 319 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 LKAAEAR1Q8TD35 194 aa12.3□□□□□ -0.44
DDR1-238ENST00000446312 BBS2Q9BXC9 721 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms