RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 PDHXO00330 501 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 SLC1A7O00341 560 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 USP2O75604 605 aaPredicted RBP11.85□□□□□ -0.51
APLF-203ENST00000445692 ZNF7P17097 686 aaPredicted RBP11.85□□□□□ -0.51
APLF-203ENST00000445692 ATF4P18848 351 aaPredicted RBP11.85□□□□□ -0.51
APLF-203ENST00000445692 LPOP22079 712 aaPredicted RBP11.85□□□□□ -0.51
APLF-203ENST00000445692 PROZP22891 400 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 TMBIM6P55061 237 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 EEFSECP57772 596 aaKnown RBP11.85□□□□□ -0.51
APLF-203ENST00000445692 IRF8Q02556 426 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 ACSM2AQ08AH3 577 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 SF3B4Q15427 424 aaKnown RBP eCLIP11.85□□□□□ -0.51
APLF-203ENST00000445692 CYBRD1Q53TN4 286 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 PPP2R2DQ66LE6 453 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 ACSM2BQ68CK6 577 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 BLOC1S3Q6QNY0 202 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 RTL3Q8N8U3 475 aaKnown RBP11.85□□□□□ -0.51
APLF-203ENST00000445692 LGALS12Q96DT0 336 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 YME1L1Q96TA2 773 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 RBM38Q9H0Z9 239 aaKnown RBP11.85□□□□□ -0.51
APLF-203ENST00000445692 ADPRHL2Q9NX46 363 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 TMEM9Q9P0T7 183 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 CLEC4AQ9UMR7 237 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 MRPS7Q9Y2R9 242 aaKnown RBP11.85□□□□□ -0.51
APLF-203ENST00000445692 GIT1Q9Y2X7 761 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 IRAK2O43187 625 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 PLOD3O60568 738 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 CPNE3O75131 537 aaKnown RBP11.85□□□□□ -0.51
APLF-203ENST00000445692 SERPINB7O75635 380 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 WEE1P30291 646 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 CDH12P55289 794 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 SYTL3Q4VX76 610 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 ELMSAN1Q6PJG2 1045 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 FAM131AQ6UXB0 335 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 LARP4Q71RC2 724 aaKnown RBP eCLIP11.85□□□□□ -0.51
APLF-203ENST00000445692 CLEC14AQ86T13 490 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 TMEM125Q96AQ2 219 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 TMEM245Q9H330 911 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 NEK6Q9HC98 313 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 PAK1IP1Q9NWT1 392 aaPredicted RBP11.85□□□□□ -0.51
APLF-203ENST00000445692 RAB23Q9ULC3 237 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 VPS9D1Q9Y2B5 631 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 HS3ST4Q9Y661 456 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 DDX60Q8IY21 1712 aaKnown RBP11.85□□□□□ -0.51
APLF-203ENST00000445692 ZNF197O14709 1029 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 TPST2O60704 377 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 SMPD1P17405 629 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 HTR1BP28222 390 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 RPS24P62847 133 aaKnown RBP11.85□□□□□ -0.51
APLF-203ENST00000445692 CDC42EP1Q00587 391 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 GANABQ14697 944 aaKnown RBP11.85□□□□□ -0.51
APLF-203ENST00000445692 CEP78Q5JTW2 689 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 TRIQKQ629K1 86 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 OR4F3Q6IEY1 312 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 ANKRD13BQ86YJ7 626 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 TMEM199Q8N511 208 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 FAM86B1Q8N7N1 296 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 STARD8Q92502 1023 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 Q96MT0 163 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 CRISPLD1Q9H336 500 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 CNOT11Q9UKZ1 510 aaKnown RBP11.85□□□□□ -0.51
APLF-203ENST00000445692 KIF13BQ9NQT8 1826 aa11.85□□□□□ -0.51
APLF-203ENST00000445692 BTBD19C9JJ37 291 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 TULP3O75386 442 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 WBP4O75554 376 aaKnown RBP11.84□□□□□ -0.51
APLF-203ENST00000445692 S1PR4O95977 384 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 FGF1P05230 155 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 TSPAN19P0C672 248 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 PABPC1P11940 636 aaKnown RBP11.84□□□□□ -0.51
APLF-203ENST00000445692 CD1DP15813 335 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 SLC11A2P49281 568 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 TAF10Q12962 218 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 TTLL9Q3SXZ7 439 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 RBM48Q5RL73 367 aaKnown RBP11.84□□□□□ -0.51
APLF-203ENST00000445692 ATAD3BQ5T9A4 648 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 AFTPHQ6ULP2 937 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 CCBE1Q6UXH8 406 aaPredicted RBP11.84□□□□□ -0.51
APLF-203ENST00000445692 MBOAT1Q6ZNC8 495 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 ARRDC4Q8NCT1 418 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 ATL1Q8WXF7 558 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 NTAN1Q96AB6 310 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 SLC9A7Q96T83 725 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 LAMB1P07942 1786 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 IFRD1O00458 451 aaPredicted RBP11.84□□□□□ -0.51
APLF-203ENST00000445692 CREG1O75629 220 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 MMP3P08254 477 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 SBK3P0C264 359 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 CCT3P49368 545 aaKnown RBP11.84□□□□□ -0.51
APLF-203ENST00000445692 ACADVLP49748 655 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 ZXDBP98169 803 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.84□□□□□ -0.51
APLF-203ENST00000445692 VTCN1Q7Z7D3 282 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 C2orf73Q8N5S3 287 aaPredicted RBP11.84□□□□□ -0.51
APLF-203ENST00000445692 DTX3Q8N9I9 347 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 KBTBD8Q8NFY9 601 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 UBE2FQ969M7 185 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 MTERF1Q99551 399 aaKnown RBP11.84□□□□□ -0.51
APLF-203ENST00000445692 DPH2Q9BQC3 489 aaPredicted RBP11.84□□□□□ -0.51
APLF-203ENST00000445692 C1QTNF1Q9BXJ1 281 aa11.84□□□□□ -0.51
APLF-203ENST00000445692 WDR6Q9NNW5 1121 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms