RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 PPIGQ13427 754 aaKnown RBP eCLIP16.46■□□□□ 0.22
LAPTM4B-201ENST00000445593 RCAN2Q14206 197 aa16.46■□□□□ 0.22
LAPTM4B-201ENST00000445593 DHCR24Q15392 516 aa16.46■□□□□ 0.22
LAPTM4B-201ENST00000445593 TBCELQ5QJ74 424 aa16.46■□□□□ 0.22
LAPTM4B-201ENST00000445593 SPATA19Q7Z5L4 167 aa16.46■□□□□ 0.22
LAPTM4B-201ENST00000445593 KCTD14Q9BQ13 255 aaPredicted RBP16.46■□□□□ 0.22
LAPTM4B-201ENST00000445593 DUS2Q9NX74 493 aaKnown RBP16.46■□□□□ 0.22
LAPTM4B-201ENST00000445593 SLC22A14Q9Y267 594 aa16.46■□□□□ 0.22
LAPTM4B-201ENST00000445593 K7EPI3 171 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 ANXA5P08758 320 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 HSPA8P11142 646 aaKnown RBP16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 ZFP36L2P47974 494 aaKnown RBP16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 SLC6A11P48066 632 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 PRKG2Q13237 762 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 NXPE3Q969Y0 559 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 ROPN1LQ96C74 230 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 PDLIM5Q96HC4 596 aaKnown RBP16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 SLC29A1Q99808 456 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 ALG2Q9H553 416 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 DNAAF2Q9NVR5 837 aaKnown RBP16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 SARDHQ9UL12 918 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 OTOL1A6NHN0 477 aaPredicted RBP16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 A6NHS1 94 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 FADS2P1A8MWK0 482 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 VPS4BO75351 444 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 CA3P07451 260 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 PRR35P0CG20 571 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 ATP1B2P14415 290 aaPredicted RBP16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 DGKGP49619 791 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 SF1Q15637 639 aaKnown RBP16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 CYP51A1Q16850 503 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 PTCHD3Q3KNS1 767 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 CMPK2Q5EBM0 449 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 ANKRD46Q86W74 232 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 RGL4Q8IZJ4 473 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 TMEM102Q8N9M5 508 aaPredicted RBP16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 SMG7Q92540 1137 aaKnown RBP16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 MED8Q96G25 268 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 P2RY13Q9BPV8 354 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 ACTL8Q9H568 366 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 PKD2L2Q9NZM6 624 aa16.45■□□□□ 0.22
LAPTM4B-201ENST00000445593 BBIP1A8MTZ0 92 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 CASQ2O14958 399 aaPredicted RBP16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 ARPC2O15144 300 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 XYLBO75191 536 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 HIST1H2AGP0C0S8 130 aaPredicted RBP16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 ATP6V1B1P15313 513 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 MSH3P20585 1137 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 HIST1H2ADP20671 130 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 CTSCP53634 463 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 FAM174BQ3ZCQ3 159 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 OGFOD2Q6N063 350 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 NANOGP8Q6NSW7 305 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 EFL1Q7Z2Z2 1120 aaKnown RBP16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 METTL3Q86U44 580 aaKnown RBP16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 LIX1Q8N485 282 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 HIST1H2AHQ96KK5 128 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 TSSK3Q96PN8 268 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 MCCC1Q96RQ3 725 aaPredicted RBP16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 HIST1H2AJQ99878 128 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 GPATCH1Q9BRR8 931 aaKnown RBP16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 H2AFJQ9BTM1 129 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 TBCDQ9BTW9 1192 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 NANOGQ9H9S0 305 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 C15orf38-AP3S2A0A0A6YYH1 394 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 MATN4O95460 622 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 CCSMST1Q4G0I0 132 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 SULT1C3Q6IMI6 304 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 ARPINQ7Z6K5 226 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 OR2T34Q8NGX1 318 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 OR2T3Q8NH03 318 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 MRGBPQ9NV56 204 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 UBAP1Q9NZ09 502 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 MAFFQ9ULX9 164 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 KNL1Q8NG31 2342 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 A0A1B0GTW7 788 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 CYP17A1P05093 508 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 GSNP06396 782 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 TIMP2P16035 220 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 EFNA1P20827 205 aaPredicted RBP16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 CD9P21926 228 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 HALP42357 657 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 POLR2LP62875 67 aaKnown RBP16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 GTDC1Q4AE62 458 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 HMBOX1Q6NT76 420 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 SELENOMQ8WWX9 145 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 TMEM125Q96AQ2 219 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 LYSMD1Q96S90 227 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 IGFLR1Q9H665 355 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 SLC52A3Q9NQ40 469 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 PFDN4Q9NQP4 134 aa16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 LEF1Q9UJU2 399 aaPredicted RBP16.44■□□□□ 0.22
LAPTM4B-201ENST00000445593 KANSL1LA0AUZ9 987 aa16.43■□□□□ 0.22
LAPTM4B-201ENST00000445593 C16orf96A6NNT2 1141 aa16.43■□□□□ 0.22
LAPTM4B-201ENST00000445593 TSPAN6O43657 245 aa16.43■□□□□ 0.22
LAPTM4B-201ENST00000445593 ELFN1P0C7U0 828 aa16.43■□□□□ 0.22
LAPTM4B-201ENST00000445593 SPANXN4Q5MJ08 99 aa16.43■□□□□ 0.22
LAPTM4B-201ENST00000445593 LYPLAL1Q5VWZ2 237 aa16.43■□□□□ 0.22
LAPTM4B-201ENST00000445593 OR52E8Q6IFG1 317 aa16.43■□□□□ 0.22
LAPTM4B-201ENST00000445593 C8orf82Q6P1X6 216 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms