RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 SPHK1Q9NYA1 384 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 CIDEBQ9UHD4 219 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 RARRES3Q9UL19 164 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 RIMKLBQ9ULI2 386 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 TTC7AQ9ULT0 858 aaPredicted RBP10.55□□□□□ -0.72
SF3A1-203ENST00000444440 BTRCQ9Y297 605 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 JRKLQ9Y4A0 524 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 HEBP2Q9Y5Z4 205 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 COLEC10Q9Y6Z7 277 aa10.55□□□□□ -0.72
SF3A1-203ENST00000444440 COL12A1Q99715 3063 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 KRT87PA6NCN2 255 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 IFRD1O00458 451 aaPredicted RBP10.54□□□□□ -0.72
SF3A1-203ENST00000444440 LIN7AO14910 233 aaPredicted RBP10.54□□□□□ -0.72
SF3A1-203ENST00000444440 ZBTB11O95625 1053 aaPredicted RBP10.54□□□□□ -0.72
SF3A1-203ENST00000444440 GAS8O95995 478 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 CTSBP07858 339 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 F7P08709 466 aaPredicted RBP10.54□□□□□ -0.72
SF3A1-203ENST00000444440 CDH3P22223 829 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 MGAT1P26572 445 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 VPS41P49754 854 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 POLE2P56282 527 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 HSD11B2P80365 405 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 GPS2Q13227 327 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 KRT33BQ14525 404 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 ZIC1Q15915 447 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 DEFB109BQ30KR1 87 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 FAM69BQ5VUD6 431 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 BORAQ6PGQ7 559 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 C4orf22Q6V702 233 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 UNC5AQ6ZN44 842 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 AMIGO1Q86WK6 493 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 KMT5CQ86Y97 462 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 FAM20CQ8IXL6 584 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 MPP5Q8N3R9 675 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 PPHLN1Q8NEY8 458 aaKnown RBP10.54□□□□□ -0.72
SF3A1-203ENST00000444440 OR6P1Q8NGX9 317 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 OR1L3Q8NH93 324 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 KIAA1143Q96AT1 154 aaPredicted RBP10.54□□□□□ -0.72
SF3A1-203ENST00000444440 MFSD3Q96ES6 412 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 SGSM3Q96HU1 749 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 PBKQ96KB5 322 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 TRAPPC9Q96Q05 1148 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 NAP1L3Q99457 506 aaPredicted RBP10.54□□□□□ -0.72
SF3A1-203ENST00000444440 MENTQ9BUN1 341 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 PITPNM3Q9BZ71 974 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 TRIT1Q9H3H1 467 aaKnown RBP10.54□□□□□ -0.72
SF3A1-203ENST00000444440 MVB12BQ9H7P6 319 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 VPS37BQ9H9H4 285 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 FAM60AQ9NP50 221 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 LHX9Q9NQ69 397 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 SOHLH2Q9NX45 425 aa10.54□□□□□ -0.72
SF3A1-203ENST00000444440 GOLGA8KD6RF30 607 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 H3BMH7 237 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 GOLGA8TH3BQL2 631 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 K7EM74 188 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 KIF5CO60282 957 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 AVILO75366 819 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 KATNA1O75449 491 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 GPC4O75487 556 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 TMEM63AO94886 807 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 FTH1P02794 183 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 UGT2B7P16662 529 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 TCN2P20062 427 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 TUBB4BP68371 445 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 PRAMEP78395 509 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 ACY1Q03154 408 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 DNASE1L3Q13609 305 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 TUBB2AQ13885 445 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 ERV3-1Q14264 604 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 GRB7Q14451 532 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 KCNJ11Q14654 390 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 FASTKD1Q53R41 847 aaKnown RBP10.53□□□□□ -0.72
SF3A1-203ENST00000444440 PCID2Q5JVF3 399 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 COLEC12Q5KU26 742 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 CTSL3PQ5NE16 218 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 ARMC6Q6NXE6 501 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 GSTA5Q7RTV2 222 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 AGGF1Q8N302 714 aaeCLIP10.53□□□□□ -0.72
SF3A1-203ENST00000444440 RASGEF1CQ8N431 466 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 OR2A14Q96R47 310 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 TUBB2BQ9BVA1 445 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 AP1M1Q9BXS5 423 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 TRIM4Q9C037 500 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 P2RY12Q9H244 342 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 PDE7BQ9NP56 450 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 C1GALT1Q9NS00 363 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 CATSPERZQ9NTU4 200 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 GEMIN8Q9NWZ8 242 aaKnown RBP10.53□□□□□ -0.72
SF3A1-203ENST00000444440 ACTR10Q9NZ32 417 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 IL1RAPL1Q9NZN1 696 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 RUVBL2Q9Y230 463 aaKnown RBP10.53□□□□□ -0.72
SF3A1-203ENST00000444440 ASF1AQ9Y294 204 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 TDRKHQ9Y2W6 561 aaKnown RBP10.53□□□□□ -0.72
SF3A1-203ENST00000444440 NEU2Q9Y3R4 380 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 MYO18BQ8IUG5 2567 aa10.53□□□□□ -0.72
SF3A1-203ENST00000444440 TMEM150CB9EJG8 249 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 QSOX1O00391 747 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 CD3EAPO15446 510 aaKnown RBP10.52□□□□□ -0.73
SF3A1-203ENST00000444440 SLC28A2O43868 658 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 SCRG1O75711 98 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms