RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 ZNF658BQ4V348 819 aaPredicted RBP13.63□□□□□ -0.23
TREX1-202ENST00000444177 DNTTIP2Q5QJE6 756 aaKnown RBP13.63□□□□□ -0.23
TREX1-202ENST00000444177 C6orf15Q6UXA7 325 aaPredicted RBP13.63□□□□□ -0.23
TREX1-202ENST00000444177 NAPRTQ6XQN6 538 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 RASGRP3Q8IV61 690 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 MPP5Q8N3R9 675 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 SLCO2A1Q92959 643 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 MFSD3Q96ES6 412 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 SGSM3Q96HU1 749 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 ELMO2Q96JJ3 720 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 C16orf45Q96MC5 204 aaPredicted RBP13.63□□□□□ -0.23
TREX1-202ENST00000444177 HGH1Q9BTY7 390 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 KIFC1Q9BW19 673 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 TSSK1BQ9BXA7 367 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 OR52A5Q9H2C5 316 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 SAMD15Q9P1V8 674 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 SEMA5BQ9P283 1151 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 ASIC3Q9UHC3 531 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 SLC24A2Q9UI40 661 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 NEU2Q9Y3R4 380 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 RPS6KL1Q9Y6S9 549 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 HECTD1Q9ULT8 2610 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 IGHV5-51A0A0C4DH38 117 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 OR5K3A6NET4 321 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 SPAG6O75602 509 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 KIAA0754O94854 1291 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 VAPBO95292 243 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 WISP1O95388 367 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 F8A1P23610 371 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 ARCN1P48444 511 aaKnown RBP13.62□□□□□ -0.23
TREX1-202ENST00000444177 CD151P48509 253 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 CSE1LP55060 971 aaKnown RBP13.62□□□□□ -0.23
TREX1-202ENST00000444177 MC1RQ01726 317 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 KCNC4Q03721 635 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 CDC20Q12834 499 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 KCNAB2Q13303 367 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 ARMC6Q6NXE6 501 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 ATG14Q6ZNE5 492 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 GALNT6Q8NCL4 622 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 ACVR1CQ8NER5 493 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 LKAAEAR1Q8TD35 194 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 ZFPM2Q8WW38 1151 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 STARD8Q92502 1023 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 UBXN4Q92575 508 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 ZNF669Q96BR6 464 aaPredicted RBP13.62□□□□□ -0.23
TREX1-202ENST00000444177 SLC41A2Q96JW4 573 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 SERPINB12Q96P63 405 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 XAB2Q9HCS7 855 aaKnown RBP13.62□□□□□ -0.23
TREX1-202ENST00000444177 HRASLS2Q9NWW9 162 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 PCYOX1Q9UHG3 505 aa13.62□□□□□ -0.23
TREX1-202ENST00000444177 UBA6A0AVT1 1052 aaPredicted RBP13.61□□□□□ -0.23
TREX1-202ENST00000444177 OR6C74A6NCV1 312 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 IQCF5A8MTL0 148 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 GOLGA8KD6RF30 607 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 GOLGA8TH3BQL2 631 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 PRMT5O14744 637 aaPredicted RBP13.61□□□□□ -0.23
TREX1-202ENST00000444177 NDUFS3O75489 264 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 MLNP12872 115 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 FOLR1P15328 257 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 PAMP19021 973 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 TCN2P20062 427 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 ARNTP27540 789 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 OAS2P29728 719 aaKnown RBP13.61□□□□□ -0.23
TREX1-202ENST00000444177 DLSTP36957 453 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 PRKAA1Q13131 559 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 TUBB2AQ13885 445 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 DEFB109BQ30KR1 87 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.61□□□□□ -0.23
TREX1-202ENST00000444177 CRTC2Q53ET0 693 aaPredicted RBP13.61□□□□□ -0.23
TREX1-202ENST00000444177 PTRHD1Q6GMV3 140 aaKnown RBP13.61□□□□□ -0.23
TREX1-202ENST00000444177 KIAA0930Q6ICG6 404 aaPredicted RBP13.61□□□□□ -0.23
TREX1-202ENST00000444177 MRNIPQ6NTE8 343 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 C16orf46Q6P387 395 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 CAND1Q86VP6 1230 aaKnown RBP13.61□□□□□ -0.23
TREX1-202ENST00000444177 PPP1R3BQ86XI6 285 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 KLHL7Q8IXQ5 586 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 PPIL6Q8IXY8 311 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 KRT222Q8N1A0 295 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 NAT8LQ8N9F0 302 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 PHC3Q8NDX5 983 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 MCUQ8NE86 351 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 OR52E1Q8NGJ3 308 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 TFGQ92734 400 aaPredicted RBP13.61□□□□□ -0.23
TREX1-202ENST00000444177 MAP3K3Q99759 626 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 TRIM56Q9BRZ2 755 aaKnown RBP13.61□□□□□ -0.23
TREX1-202ENST00000444177 TUBB2BQ9BVA1 445 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 MVB12BQ9H7P6 319 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 PDE7BQ9NP56 450 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 GNPTGQ9UJJ9 305 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 TUBD1Q9UJT1 453 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 ASF1AQ9Y294 204 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 MRPS18BQ9Y676 258 aaKnown RBP13.61□□□□□ -0.23
TREX1-202ENST00000444177 FLNCQ14315 2725 aa13.61□□□□□ -0.23
TREX1-202ENST00000444177 SLC5A10A0PJK1 596 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 GSAPA4D1B5 854 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 TLCD2A6NGC4 264 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 TERTO14746 1132 aaKnown RBP13.6□□□□□ -0.23
TREX1-202ENST00000444177 SEC16AO15027 2179 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 CCNYL3P0C7X3 344 aa13.6□□□□□ -0.23
TREX1-202ENST00000444177 POLR2CP19387 275 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms