RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 LACTB2Q53H82 288 aaPredicted RBP9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 CDKL4Q5MAI5 379 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 KIAA0895LQ68EN5 471 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 MAVSQ7Z434 540 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 MTDHQ86UE4 582 aaKnown RBP9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 TCAIMQ8N3R3 496 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 OXR1Q8N573 874 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 FAM160A2Q8N612 972 aaPredicted RBP9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 ZNF483Q8TF39 744 aaPredicted RBP9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 CLDN23Q96B33 292 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 FAR2Q96K12 515 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 PPP1R36Q96LQ0 422 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 EBF4Q9BQW3 602 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 NUF2Q9BZD4 464 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 OSGEPL1Q9H4B0 414 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 STN1Q9H668 368 aaKnown RBP9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 DNAJC28Q9NX36 388 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 WSB2Q9NYS7 404 aaPredicted RBP9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 OPTCQ9UBM4 332 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 SLC23A2Q9UGH3 650 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 APOBEC2Q9Y235 224 aaKnown RBP9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 DNMT3AQ9Y6K1 912 aaPredicted RBP9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 TRPC5OSA6NMA1 111 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 ARHGEF33A8MVX0 844 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 TAPBPO15533 448 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 SKAP2O75563 359 aaPredicted RBP9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 IGHV4-34P06331 123 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 DCNP07585 359 aaKnown RBP9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 SERPINB3P29508 390 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 MLLT3P42568 568 aaPredicted RBP9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 GDF5P43026 501 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 BDKRB1P46663 353 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 RPS9P46781 194 aaKnown RBP9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 HNMTP50135 292 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 IDH3AP50213 366 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 CCR5P51681 352 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 THOP1P52888 689 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 KIAA1024LP59773 190 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 RPA4Q13156 261 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 GTF2H2Q13888 395 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 NFATC4Q14934 902 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 CLEC6AQ6EIG7 209 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 GTF2H2CQ6P1K8 395 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 FAM83HQ6ZRV2 1179 aaPredicted RBP9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 FITM2Q8N6M3 262 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 TEX9Q8N6V9 391 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 FRMD1Q8N878 549 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 OR56A4Q8NGH8 313 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 SNX19Q92543 992 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 ATP6V1E2Q96A05 226 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 BIRC7Q96CA5 298 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 ERP27Q96DN0 273 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 PHF12Q96QT6 1004 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 TMEM79Q9BSE2 394 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 CD244Q9BZW8 370 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 NOL11Q9H8H0 719 aaKnown RBP9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 ZBTB26Q9HCK0 441 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 FGF22Q9HCT0 170 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 TNFRSF12AQ9NP84 129 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 MRPL40Q9NQ50 206 aaKnown RBP9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 SUFUQ9UMX1 484 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 GPSM3Q9Y4H4 160 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 TRAF6Q9Y4K3 522 aa9.28□□□□□ -0.92
SMPD4P1-203ENST00000443839 LAMA1P25391 3075 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 IGHV1OR15-9A0A0B4J2B8 117 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 KRT87PA6NCN2 255 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 PRAMEF26H0Y7S4 382 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 ZNF195O14628 629 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 AZIN1O14977 448 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 NDUFS2O75306 463 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 STK16O75716 305 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 RASSF9O75901 435 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 FUCA1P04066 466 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 HOXC4P09017 264 aaPredicted RBP9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 SLC35G4P0C7Q5 338 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 GNPDA1P46926 289 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 CAMK2BQ13554 666 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 SPRED3Q2MJR0 410 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 METRNLQ641Q3 311 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 METTL2BQ6P1Q9 378 aaKnown RBP9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 EPGNQ6UW88 154 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 ENPP7Q6UWV6 458 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 GCNT7Q6ZNI0 430 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 GPRIN3Q6ZVF9 776 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 GOLGA7Q7Z5G4 137 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 PDZD3Q86UT5 571 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 ALYREFQ86V81 257 aaKnown RBP9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 GBP7Q8N8V2 638 aaPredicted RBP9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 TMEM145Q8NBT3 493 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 MAPK15Q8TD08 544 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 AGAP11Q8TF27 550 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 UBTD2Q8WUN7 234 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 CCT6BQ92526 530 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 BMFQ96LC9 184 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 WDR92Q96MX6 357 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 TIMM29Q9BSF4 260 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 CARS2Q9HA77 564 aaKnown RBP9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 KLC4Q9NSK0 619 aa9.27□□□□□ -0.93
SMPD4P1-203ENST00000443839 ZFP69BQ9UJL9 534 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms