RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 MARCH4Q9P2E8 410 aaPredicted RBP7.4□□□□□ -1.22
HDAC9-214ENST00000441542 CACNG4Q9UBN1 327 aa7.4□□□□□ -1.22
HDAC9-214ENST00000441542 DNAJB9Q9UBS3 223 aa7.4□□□□□ -1.22
HDAC9-214ENST00000441542 POLR3HQ9Y535 204 aaPredicted RBP7.4□□□□□ -1.22
HDAC9-214ENST00000441542 NME7Q9Y5B8 376 aa7.4□□□□□ -1.22
HDAC9-214ENST00000441542 CLCA3PQ9Y6N3 262 aa7.4□□□□□ -1.22
HDAC9-214ENST00000441542 CIB4A0PJX0 185 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 FAM25AB3EWG3 89 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 FAM25CB3EWG5 89 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 FAM25GB3EWG6 89 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 H3BM21 787 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 DPYSL4O14531 572 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 FFAR3O14843 346 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 GPR42O15529 346 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 PLA2G6O60733 806 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 B3GALT4O96024 378 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 PIGRP01833 764 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 YES1P07947 543 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 HSD3B2P26439 372 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 KRT20P35900 424 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 CTSKP43235 329 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 GLUD2P49448 558 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 EFNA5P52803 228 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 RBP5P82980 135 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 TOP3AQ13472 1001 aaPredicted RBP7.4□□□□□ -1.23
HDAC9-214ENST00000441542 NFE2L1Q14494 772 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 MED22Q15528 200 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 SLC10A6Q3KNW5 377 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 CRY2Q49AN0 593 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 PDZD4Q76G19 769 aaPredicted RBP7.4□□□□□ -1.23
HDAC9-214ENST00000441542 UBQLNLQ8IYU4 475 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 ZNF557Q8N988 423 aaPredicted RBP7.4□□□□□ -1.23
HDAC9-214ENST00000441542 VANGL1Q8TAA9 524 aaPredicted RBP7.4□□□□□ -1.23
HDAC9-214ENST00000441542 UTP15Q8TED0 518 aaKnown RBP7.4□□□□□ -1.23
HDAC9-214ENST00000441542 CHAC2Q8WUX2 184 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 SLC35F5Q8WV83 523 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 DEDD2Q8WXF8 326 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 DHRS9Q9BPW9 319 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 KATNAL1Q9BW62 490 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 ACAT2Q9BWD1 397 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 LRRC3Q9BY71 257 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 IKZF5Q9H5V7 419 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 ZNF224Q9NZL3 707 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 PDP1Q9P0J1 537 aaPredicted RBP7.4□□□□□ -1.23
HDAC9-214ENST00000441542 GALPQ9UBC7 116 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 PKP3Q9Y446 797 aa7.4□□□□□ -1.23
HDAC9-214ENST00000441542 ATP6V1G2-DDX39BF2Z307 99 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 B4GALT4O60513 344 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 OR4F21O95013 312 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 C7P10643 843 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 UMPSP11172 480 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 G6PDP11413 515 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 MAPK12P53778 367 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 HOXC5Q00444 222 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 CREMQ03060 361 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 CACNB2Q08289 660 aaPredicted RBP7.39□□□□□ -1.23
HDAC9-214ENST00000441542 IL18R1Q13478 541 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 OR4D1Q15615 310 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 ZNF691Q5VV52 312 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 EFCAB12Q6NXP0 572 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 CEP68Q76N32 757 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 OTOP2Q7RTS6 562 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 PODNQ7Z5L7 613 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 TTC29Q8NA56 475 aaPredicted RBP7.39□□□□□ -1.23
HDAC9-214ENST00000441542 ST13P5Q8NFI4 369 aaPredicted RBP7.39□□□□□ -1.23
HDAC9-214ENST00000441542 RMDN1Q96DB5 314 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 BTN2A3PQ96KV6 586 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 MOGAT1Q96PD6 335 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 KCNC2Q96PR1 638 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 SNX18Q96RF0 628 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 CNPPD1Q9BV87 410 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 CDADC1Q9BWV3 514 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 HDHD5Q9BXW7 423 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 UGT2B28Q9BY64 529 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 GOLGA2P5Q9HBQ8 144 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 SDR39U1Q9NRG7 319 aaPredicted RBP7.39□□□□□ -1.23
HDAC9-214ENST00000441542 RBM22Q9NW64 420 aaKnown RBP eCLIP7.39□□□□□ -1.23
HDAC9-214ENST00000441542 VAPAQ9P0L0 249 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 ZNF70Q9UC06 446 aaPredicted RBP7.39□□□□□ -1.23
HDAC9-214ENST00000441542 MUTYHQ9UIF7 546 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 MAGEL2Q9UJ55 1249 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 RNF112Q9ULX5 631 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 RWDD3Q9Y3V2 267 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 DSCR3O14972 297 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 BEST1O76090 585 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 PAHP00439 452 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 CNPP09543 421 aaKnown RBP7.39□□□□□ -1.23
HDAC9-214ENST00000441542 IL7P13232 177 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 PAMP19021 973 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 AQP1P29972 269 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 RRM2P31350 389 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 HTR6P50406 440 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 ARSDP51689 593 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 CYP4F8P98187 520 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 PTGR1Q14914 329 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 ISCA2Q86U28 154 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 SLC22A9Q8IVM8 553 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 PHC2Q8IXK0 858 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 RIMKLAQ8IXN7 391 aa7.39□□□□□ -1.23
HDAC9-214ENST00000441542 OR8H3Q8N146 312 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms