RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 SIX3O95343 332 aaPredicted RBP16.5■□□□□ 0.23
PMS1-213ENST00000441310 CBLP22681 906 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 HTR1EP28566 365 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 PKLRP30613 574 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 KCNC1P48547 511 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 FCGRTP55899 365 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 SOWAHCQ53LP3 525 aaPredicted RBP16.5■□□□□ 0.23
PMS1-213ENST00000441310 AGAP9Q5VTM2 703 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 HORMAD1Q86X24 394 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 RDH12Q96NR8 316 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 RBM4BQ9BQ04 359 aaKnown RBP16.5■□□□□ 0.23
PMS1-213ENST00000441310 RBM4Q9BWF3 364 aaKnown RBP16.5■□□□□ 0.23
PMS1-213ENST00000441310 ACOT13Q9NPJ3 140 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 TMLHEQ9NVH6 421 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 TPRKBQ9Y3C4 175 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 MKI67P46013 3256 aaKnown RBP16.5■□□□□ 0.23
PMS1-213ENST00000441310 MN1Q10571 1320 aaPredicted RBP16.5■□□□□ 0.23
PMS1-213ENST00000441310 EEF2KO00418 725 aaKnown RBP16.5■□□□□ 0.23
PMS1-213ENST00000441310 SERPINH1P50454 418 aaKnown RBP16.5■□□□□ 0.23
PMS1-213ENST00000441310 UFM1P61960 85 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 ZNF45Q02386 682 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 SLAMF1Q13291 335 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 NKG7Q16617 165 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 LRRC26Q2I0M4 334 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 ZNF789Q5FWF6 425 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 KCTD11Q693B1 232 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 TMEM179BQ7Z7N9 219 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 NOXA1Q86UR1 476 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 RYBPQ8N488 228 aaPredicted RBP16.5■□□□□ 0.23
PMS1-213ENST00000441310 KIAA1958Q8N8K9 716 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 SCAMP5Q8TAC9 235 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 GTF2H4Q92759 462 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 SCN3BQ9NY72 215 aa16.5■□□□□ 0.23
PMS1-213ENST00000441310 TULP3O75386 442 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 YES1P07947 543 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 ANXA6P08133 673 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 OR4Q2P0C623 313 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 PRKAR2AP13861 404 aaKnown RBP16.49■□□□□ 0.23
PMS1-213ENST00000441310 TGFBR2P37173 567 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 TRIM71Q2Q1W2 868 aaKnown RBP16.49■□□□□ 0.23
PMS1-213ENST00000441310 UNC50Q53HI1 259 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 ANKRD49Q8WVL7 239 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 RNF34Q969K3 372 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 MYLPFQ96A32 169 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 NECTIN4Q96NY8 510 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 SIK2Q9H0K1 926 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 TNKS2Q9H2K2 1166 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 RIBC2Q9H4K1 309 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 ANKHQ9HCJ1 492 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 SLC52A3Q9NQ40 469 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 POLG2Q9UHN1 485 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 SNTNA6NMZ2 147 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 PTGS2P35354 604 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 DAOAP59103 153 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 SLC35A2P78381 396 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 CDH17Q12864 832 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 LAPTM4AQ15012 233 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 SCIMPQ6UWF3 145 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 KDELC2Q7Z4H8 507 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 PJA1Q8NG27 643 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 CCDC120Q96HB5 630 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 REXO5Q96IC2 774 aaKnown RBP16.49■□□□□ 0.23
PMS1-213ENST00000441310 LIMD1Q9UGP4 676 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 RALGAPA2Q2PPJ7 1873 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 RGS10O43665 173 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 FAM20BO75063 409 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 CYP7B1O75881 506 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 LTA4HP09960 611 aaKnown RBP16.49■□□□□ 0.23
PMS1-213ENST00000441310 POLR2CP19387 275 aaPredicted RBP16.49■□□□□ 0.23
PMS1-213ENST00000441310 M6PRP20645 277 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 RPL34P49207 117 aaKnown RBP16.49■□□□□ 0.23
PMS1-213ENST00000441310 POU6F2P78424 691 aaPredicted RBP16.49■□□□□ 0.23
PMS1-213ENST00000441310 CD83Q01151 205 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 PLEKHG6Q3KR16 790 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 FBXO48Q5FWF7 155 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 ZNF678Q5SXM1 525 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 FAM205BPQ63HN1 556 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 DENND5AQ6IQ26 1287 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 SLC51BQ86UW2 128 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 LRRTM3Q86VH5 581 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 TCAIMQ8N3R3 496 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 TUBB1Q9H4B7 451 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 POLR3BQ9NW08 1133 aaPredicted RBP16.49■□□□□ 0.23
PMS1-213ENST00000441310 COMMD8Q9NX08 183 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 USE1Q9NZ43 259 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 DNAJB9Q9UBS3 223 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 NUFIP1Q9UHK0 495 aaKnown RBP16.49■□□□□ 0.23
PMS1-213ENST00000441310 MAGEL2Q9UJ55 1249 aa16.49■□□□□ 0.23
PMS1-213ENST00000441310 GPR182O15218 404 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 RECQL5O94762 991 aaPredicted RBP16.48■□□□□ 0.23
PMS1-213ENST00000441310 MATN4O95460 622 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 CYP11A1P05108 521 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 ERCC2P18074 760 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 GADD45AP24522 165 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 UQCRC1P31930 480 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 ADRA1BP35368 520 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 LIPAP38571 399 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 PHYKPLQ8IUZ5 450 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 AMER2Q8N7J2 671 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 CELF6Q96J87 481 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms