RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 DFFAO00273 331 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 MATN3O15232 486 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 COL6A1P12109 1028 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 HOXC13P31276 330 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 MASP1P48740 699 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 LCP2Q13094 533 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 NKG7Q16617 165 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 CCBE1Q6UXH8 406 aaPredicted RBP11.69□□□□□ -0.54
LTBR-203ENST00000441074 SLC24A5Q71RS6 500 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 B3GNT8Q7Z7M8 397 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 ZFAND4Q86XD8 727 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 CILP2Q8IUL8 1156 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 FAM126BQ8IXS8 530 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 ZMIZ2Q8NF64 920 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 OR52K2Q8NGK3 314 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 FRS2Q8WU20 508 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 SMARCD1Q96GM5 515 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 NUSAP1Q9BXS6 441 aaKnown RBP11.69□□□□□ -0.54
LTBR-203ENST00000441074 C11orf49Q9H6J7 331 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 CATSPERBQ9H7T0 1116 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 RGS18Q9NS28 235 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 SCN3BQ9NY72 215 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 TMA7Q9Y2S6 64 aaKnown RBP11.69□□□□□ -0.54
LTBR-203ENST00000441074 ANGPTL3Q9Y5C1 460 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 ORC6Q9Y5N6 252 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 SNX10Q9Y5X0 201 aa11.69□□□□□ -0.54
LTBR-203ENST00000441074 EFCAB9A8MZ26 197 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 PMPCBO75439 489 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 CRCPO75575 148 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 S1PR4O95977 384 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 MTHFD2P13995 350 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 OR1G1P47890 313 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 ZNF45Q02386 682 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 TRAF3Q13114 568 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 RAPSNQ13702 412 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 DGCR6Q14129 220 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 XKR7Q5GH72 579 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 ENPP6Q6UWR7 440 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 GDPD3Q7L5L3 318 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 BHLHA9Q7RTU4 235 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 EFL1Q7Z2Z2 1120 aaKnown RBP11.68□□□□□ -0.54
LTBR-203ENST00000441074 TAC4Q86UU9 113 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 ADHFE1Q8IWW8 467 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 EID3Q8N140 333 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 METTL4Q8N3J2 472 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 FAM86B1Q8N7N1 296 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 FAM83FQ8NEG4 500 aaPredicted RBP11.68□□□□□ -0.54
LTBR-203ENST00000441074 OR6F1Q8NGZ6 308 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 RHEBL1Q8TAI7 183 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 GIPC2Q8TF65 315 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 RASSF5Q8WWW0 418 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 RPL3LQ92901 407 aaKnown RBP11.68□□□□□ -0.54
LTBR-203ENST00000441074 SLC47A1Q96FL8 570 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 MRGPRX2Q96LB1 330 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 DCSTAMPQ9H295 470 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 ACTR8Q9H981 624 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 TMEFF2Q9UIK5 374 aaPredicted RBP11.68□□□□□ -0.54
LTBR-203ENST00000441074 CDH9Q9ULB4 789 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 PNMA8BQ9ULN7 279 aaPredicted RBP11.68□□□□□ -0.54
LTBR-203ENST00000441074 HSPE1-MOB4S4R3N1 261 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 NUP205Q92621 2012 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.68□□□□□ -0.54
LTBR-203ENST00000441074 ARNTLO00327 626 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 HAT1O14929 419 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 SLC7A4O43246 635 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 MT-ND2P03891 347 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 PRKCAP17252 672 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 FMO3P31513 532 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 TGFBR2P37173 567 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 DCTP40126 519 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 PGFP49763 221 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 MTPNP58546 118 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 ERVK-8P63133 956 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 PRKG2Q13237 762 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 TUSC3Q13454 348 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 LAPTM5Q13571 262 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 TRIP4Q15650 581 aaPredicted RBP11.68□□□□□ -0.54
LTBR-203ENST00000441074 BRMS1LQ5PSV4 323 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 SDHAF4Q5VUM1 108 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 ZNF544Q6NX49 715 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 TXNDC11Q6PKC3 985 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 SLC39A5Q6ZMH5 540 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 CCDC81Q6ZN84 652 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 ARHGAP36Q6ZRI8 547 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 PIM3Q86V86 326 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 ARHGAP12Q8IWW6 846 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 SCAMP5Q8TAC9 235 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 FBXO30Q8TB52 745 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 PROKR1Q8TCW9 393 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 EDEM1Q92611 657 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 RNF34Q969K3 372 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 MED30Q96HR3 178 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 PPM1MQ96MI6 270 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 ZNF583Q96ND8 569 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 ZNF599Q96NL3 588 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 ACOT13Q9NPJ3 140 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 NEU3Q9UQ49 428 aa11.68□□□□□ -0.54
LTBR-203ENST00000441074 CHD7Q9P2D1 2997 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 MYLKQ15746 1914 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 A0A1B0GTL3 188 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 1304 ms