RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 PLEKHS1Q5SXH7 462 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 HENMT1Q5T8I9 393 aaKnown RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 METTL21CQ5VZV1 264 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 SEL1L3Q68CR1 1132 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 KIAA1161Q6NSJ0 714 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 CGB2Q6NT52 195 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 CDPF1Q6NVV7 123 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 NEK5Q6P3R8 708 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 TMEM207Q6UWW9 146 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 NAPRTQ6XQN6 538 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 PRR23CQ6ZRP0 262 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 ZCCHC23Q6ZST2 131 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 NEK10Q6ZWH5 1172 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 USP30Q70CQ3 517 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 FRA10AC1Q70Z53 315 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 EFL1Q7Z2Z2 1120 aaKnown RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 KBTBD6Q86V97 674 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 PHYKPLQ8IUZ5 450 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 FAM20CQ8IXL6 584 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 MYO1HQ8N1T3 1032 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 FBXO39Q8N4B4 442 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 SPATA6LQ8N4H0 392 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 CHCHD4Q8N4Q1 142 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 CLDN19Q8N6F1 224 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 PTGR2Q8N8N7 351 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 PNPLA1Q8N8W4 532 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 SIDT2Q8NBJ9 832 aaKnown RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 TXNDC5Q8NBS9 432 aaKnown RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 ST13P5Q8NFI4 369 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 RFWD2Q8NHY2 731 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 CD200R1Q8TD46 325 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 CXorf40AQ8TE69 158 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 GANCQ8TET4 914 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 FBLIM1Q8WUP2 373 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 EEF1AKMT1Q8WVE0 214 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 C10orf82Q8WW14 230 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 ASZ1Q8WWH4 475 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 GATAD2BQ8WXI9 593 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 CCT6BQ92526 530 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 SCAMP4Q969E2 229 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 GLYATL1Q969I3 302 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 PTERQ96BW5 349 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 NUS1Q96E22 293 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 SGF29Q96ES7 293 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 RILPQ96NA2 401 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 FANCD2OSQ96PS1 177 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 ATOH8Q96SQ7 321 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 ACOX2Q99424 681 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 SORT1Q99523 831 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 CCM2Q9BSQ5 444 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 WRAP53Q9BUR4 548 aaKnown RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 C1QTNF7Q9BXJ2 289 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 C1QTNF3Q9BXJ4 246 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 TMEM120AQ9BXJ8 343 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 ERVK-6Q9BXR3 956 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 FAM126AQ9BYI3 521 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 TRIM54Q9BYV2 358 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 TGIF2Q9GZN2 237 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 GSX1Q9H4S2 264 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 KCNK12Q9HB15 430 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 CAPN10Q9HC96 672 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 FBRSL1Q9HCM7 1045 aaKnown RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 TRIM39Q9HCM9 518 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 SLC2A4RGQ9NR83 387 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 TXLNGQ9NUQ3 528 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 DNAJC28Q9NX36 388 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 CD274Q9NZQ7 290 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 STOML1Q9UBI4 398 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 HEY2Q9UBP5 337 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 CD84Q9UIB8 345 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 ZFP69BQ9UJL9 534 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 FZD4Q9ULV1 537 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 GPR34Q9UPC5 381 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 NCKAP1Q9Y2A7 1128 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 RAXQ9Y2V3 346 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 MED16Q9Y2X0 877 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 TNPO3Q9Y5L0 923 aaKnown RBP3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 FADS3Q9Y5Q0 445 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 CORINQ9Y5Q5 1042 aa3.9□□□□□ -1.79
HMGB1P37-201ENST00000439613 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 C17orf113A0A1B0GUU1 675 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 FAM221AA4D161 298 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 NPEPPSL1A6NEC2 478 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 SUPT3HB4E1H0 165 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 UBXN8O00124 270 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 CDC7O00311 574 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 MATN2O00339 956 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 LIN7AO14910 233 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 SLC22A2O15244 555 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 MID1O15344 667 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 ITM2AO43736 263 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 VEGFDO43915 354 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 NUAK1O60285 661 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 VPS4BO75351 444 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 SUPT3HO75486 399 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 LYPLA1O75608 230 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 RNASEH2AO75792 299 aaKnown RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 TM7SF2O76062 418 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 SUPT7LO94864 414 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 SLCO2B1O94956 709 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms