RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 TBC1D14Q9P2M4 693 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 SLCO3A1Q9UIG8 710 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 ZNF490Q9ULM2 529 aaPredicted RBP8.89□□□□□ -0.99
COPB1-202ENST00000439561 WBP11Q9Y2W2 641 aaKnown RBP8.89□□□□□ -0.99
COPB1-202ENST00000439561 BOLA1Q9Y3E2 137 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 PCDHGA3Q9Y5H0 932 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 PMF1-BGLAPU3KQ54 211 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 A0A1W2PQ67 120 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 TRIM64CA6NLI5 447 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 FAM47E-STBD1D6RA91 191 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 PER2O15055 1255 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 FGF1P05230 155 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 JUNBP17275 347 aaPredicted RBP8.89□□□□□ -0.99
COPB1-202ENST00000439561 ITIH1P19827 911 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 SOX6P35712 828 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 FAM189BP81408 668 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 ABRAXAS2Q15018 415 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 PON2Q15165 354 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 MARCH8Q5T0T0 291 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 GTF2IRD2BQ6EKJ0 949 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 DOK6Q6PKX4 331 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 GTF2IRD2Q86UP8 949 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 PPP3R2Q96LZ3 170 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 KCNC2Q96PR1 638 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 NUSAP1Q9BXS6 441 aaKnown RBP8.89□□□□□ -0.99
COPB1-202ENST00000439561 CARS2Q9HA77 564 aaKnown RBP8.89□□□□□ -0.99
COPB1-202ENST00000439561 OPTCQ9UBM4 332 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 ASB1Q9Y576 335 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 UPK3BL1B0FP48 263 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 UPK3BL2E5RIL1 263 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 CCRL2O00421 344 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 RFXANKO14593 260 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 PTGESO14684 152 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 PGRP06401 933 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 CHRM5P08912 532 aaPredicted RBP8.89□□□□□ -0.99
COPB1-202ENST00000439561 POU2F1P14859 743 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 HOXB8P17481 243 aaPredicted RBP8.89□□□□□ -0.99
COPB1-202ENST00000439561 OR2B6P58173 313 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 CDC42EP1Q00587 391 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 GTF2H2Q13888 395 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 MFSD10Q14728 455 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 CTF1Q16619 201 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 TIGD6Q17RP2 521 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 DPY19L1Q2PZI1 675 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 GTF2H2CQ6P1K8 395 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 C8orf82Q6P1X6 216 aaPredicted RBP8.89□□□□□ -0.99
COPB1-202ENST00000439561 SLC16A12Q6ZSM3 486 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 ATP6V0D2Q8N8Y2 350 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 OR7D4Q8NG98 312 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 NETO1Q8TDF5 533 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 ZNF486Q96H40 463 aaPredicted RBP8.89□□□□□ -0.99
COPB1-202ENST00000439561 SPATA17Q96L03 361 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 Q96MT0 163 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 MBOAT4Q96T53 435 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 SEPT5Q99719 369 aaPredicted RBP8.89□□□□□ -0.99
COPB1-202ENST00000439561 AP5M1Q9H0R1 490 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 NSUN3Q9H649 340 aaKnown RBP8.89□□□□□ -0.99
COPB1-202ENST00000439561 PCTPQ9UKL6 214 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 OGDHLQ9ULD0 1010 aa8.89□□□□□ -0.99
COPB1-202ENST00000439561 ARID2Q68CP9 1835 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 LTBP1Q14766 1721 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 NFKBIEO00221 500 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 LDB2O43679 373 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 TSC22D2O75157 780 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 SCELO95171 688 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 OTCP00480 354 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 VIPP01282 170 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 HTR1AP08908 422 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 HLA-DPA1P20036 260 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 SLC26A3P40879 764 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 NKG7Q16617 165 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 SOWAHCQ53LP3 525 aaPredicted RBP8.88□□□□□ -0.99
COPB1-202ENST00000439561 STEAP3Q658P3 488 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 BEND5Q7L4P6 421 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 TMEM179BQ7Z7N9 219 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 PTRH1Q86Y79 214 aaKnown RBP8.88□□□□□ -0.99
COPB1-202ENST00000439561 PHYKPLQ8IUZ5 450 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 BRSK1Q8TDC3 778 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 SELENOMQ8WWX9 145 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 CDCA5Q96FF9 252 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 ZNF583Q96ND8 569 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 ALOXE3Q9BYJ1 711 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 CLPBQ9H078 707 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 SMOC2Q9H3U7 446 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 ELOVL6Q9H5J4 265 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 LRTM1Q9HBL6 345 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 AKIP1Q9NQ31 210 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 SCUBE2Q9NQ36 999 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 FARSBQ9NSD9 589 aaKnown RBP8.88□□□□□ -0.99
COPB1-202ENST00000439561 TMLHEQ9NVH6 421 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 ERVK13-1Q9NX77 482 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 SMPD4Q9NXE4 827 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 DUSP12Q9UNI6 340 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 NOD1Q9Y239 953 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 NOX1Q9Y5S8 564 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 FAM92AA1XBS5 289 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 LCHNA4D1U4 455 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 KRT87PA6NCN2 255 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 CTPS1P17812 591 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 GADD45AP24522 165 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms