RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 NRBF2Q96F24 287 aa16.08■□□□□ 0.16
CLCNKA-203ENST00000439316 TMEM169Q96HH4 297 aa16.08■□□□□ 0.16
CLCNKA-203ENST00000439316 PLEKHA8Q96JA3 519 aa16.08■□□□□ 0.16
CLCNKA-203ENST00000439316 ZBTB18Q99592 522 aa16.08■□□□□ 0.16
CLCNKA-203ENST00000439316 OSBPL10Q9BXB5 764 aa16.08■□□□□ 0.16
CLCNKA-203ENST00000439316 IPPKQ9H8X2 491 aa16.08■□□□□ 0.16
CLCNKA-203ENST00000439316 GPN2Q9H9Y4 310 aaPredicted RBP16.08■□□□□ 0.16
CLCNKA-203ENST00000439316 FAM118AQ9NWS6 357 aa16.08■□□□□ 0.16
CLCNKA-203ENST00000439316 IL17CQ9P0M4 197 aa16.08■□□□□ 0.16
CLCNKA-203ENST00000439316 PRKAG2Q9UGJ0 569 aa16.08■□□□□ 0.16
CLCNKA-203ENST00000439316 ZNF711Q9Y462 761 aa16.08■□□□□ 0.16
CLCNKA-203ENST00000439316 PLXNA4Q9HCM2 1894 aa16.08■□□□□ 0.16
CLCNKA-203ENST00000439316 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 A0A0U1RQS6 177 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 CBFA2T3O75081 653 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 KATNA1O75449 491 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 CD160O95971 181 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 IL7RP16871 459 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 ZNF182P17025 639 aaPredicted RBP16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 C21orf59P57076 290 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 GABARAPL2P60520 117 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 SMARCB1Q12824 385 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 ZNF177Q13360 481 aaPredicted RBP16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 GTF2IRD2BQ6EKJ0 949 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 MILR1Q7Z6M3 343 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 GTF2IRD2Q86UP8 949 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 DENND1CQ8IV53 801 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 ZC3H7AQ8IWR0 971 aaKnown RBP16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 MSRB3Q8IXL7 192 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 SLC39A11Q8N1S5 342 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 SVOPLQ8N434 492 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 CHDHQ8NE62 594 aaPredicted RBP16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 ITFG2Q969R8 447 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 MAGED4Q96JG8 741 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 LHPPQ9H008 270 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 IKZF5Q9H5V7 419 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 PALMDQ9NP74 551 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 ELOVL2Q9NXB9 296 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 MTRRQ9UBK8 725 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 EIF3LQ9Y262 564 aaKnown RBP16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 KIAA1671Q9BY89 1806 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 A0A1B0GVM2 712 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 GOLGA8CPA6NN73 597 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 GSTA4O15217 222 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 TAPBPO15533 448 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 GJB5O95377 273 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 SLC2A4P14672 509 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 ZNF12P17014 697 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 AKT1P31749 480 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 OR1D2P34982 312 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 PLIN5Q00G26 463 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 PTGR1Q14914 329 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 RBM12BQ8IXT5 1001 aaKnown RBP16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 SPARTQ8N0X7 666 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 OR10A6Q8NH74 314 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 FBXO30Q8TB52 745 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 SLC47A1Q96FL8 570 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 AMBRA1Q9C0C7 1298 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 NSUN3Q9H649 340 aaKnown RBP16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 SMURF2Q9HAU4 748 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 TSR3Q9UJK0 312 aaKnown RBP16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 TDRKHQ9Y2W6 561 aaKnown RBP16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 OARD1Q9Y530 152 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 PCDHGA8Q9Y5G5 932 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 SLC30A1Q9Y6M5 507 aa16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 RANBP2P49792 3224 aaKnown RBP16.07■□□□□ 0.16
CLCNKA-203ENST00000439316 RGS14O43566 566 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 SCELO95171 688 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 CST1P01037 141 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 FGBP02675 491 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 KLKB1P03952 638 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 SOD2P04179 222 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 TFPTP0C1Z6 253 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 LAG3P18627 525 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 RPS3P23396 243 aaKnown RBP eCLIP16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 HSPA7P48741 367 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 BMXP51813 675 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 MAPK10P53779 464 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 IST1P53990 364 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 MAD2L1Q13257 205 aaPredicted RBP16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 RNF219Q5W0B1 726 aaPredicted RBP16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 SLC8B1Q6J4K2 584 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 CXorf57Q6NSI4 855 aaKnown RBP16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 CERS6Q6ZMG9 384 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 GLB1L3Q8NCI6 653 aaPredicted RBP16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 C2orf15Q8WU43 125 aaKnown RBP16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 PLD4Q96BZ4 506 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 EID2BQ96D98 161 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 CCDC97Q96F63 343 aaPredicted RBP16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 ADNPQ9H2P0 1102 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 ACTR8Q9H981 624 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 ASIC5Q9NY37 505 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 SLC25A37Q9NYZ2 338 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 LHX3Q9UBR4 397 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 LIMD1Q9UGP4 676 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 ADGRE2Q9UHX3 823 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 ZMYM5Q9UJ78 669 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 PSME2Q9UL46 239 aa16.06■□□□□ 0.16
CLCNKA-203ENST00000439316 PKP3Q9Y446 797 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms