RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 RPN2P04844 631 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 JUPP14923 745 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 MCM3P25205 808 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 GP5P40197 560 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 TUBB4BP68371 445 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 CFHR1Q03591 330 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 ABRQ12979 859 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 PRKG2Q13237 762 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 CLPPQ16740 277 aaPredicted RBP16.46■□□□□ 0.23
TARDBP-203ENST00000439080 UGT3A1Q6NUS8 523 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 USP53Q70EK8 1073 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 B3GNT8Q7Z7M8 397 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 DCUN1D3Q8IWE4 304 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 TBC1D21Q8IYX1 336 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 OR52E1Q8NGJ3 308 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 INPP5DQ92835 1189 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 FUT8Q9BYC5 575 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 ACSS3Q9H6R3 686 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 NFS1Q9Y697 457 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 CEP295Q9C0D2 2601 aa16.46■□□□□ 0.23
TARDBP-203ENST00000439080 FRYQ5TBA9 3013 aa16.45■□□□□ 0.22
TARDBP-203ENST00000439080 ENO3P13929 434 aaPredicted RBP16.45■□□□□ 0.22
TARDBP-203ENST00000439080 AMD1P17707 334 aa16.45■□□□□ 0.22
TARDBP-203ENST00000439080 CD9P21926 228 aa16.45■□□□□ 0.22
TARDBP-203ENST00000439080 BDKRB1P46663 353 aa16.45■□□□□ 0.22
TARDBP-203ENST00000439080 PGGT1BP53609 377 aa16.45■□□□□ 0.22
TARDBP-203ENST00000439080 TARDBPQ13148 414 aaKnown RBP eCLIP16.45■□□□□ 0.22
TARDBP-203ENST00000439080 PDAP1Q13442 181 aaKnown RBP16.45■□□□□ 0.22
TARDBP-203ENST00000439080 ISXQ2M1V0 245 aa16.45■□□□□ 0.22
TARDBP-203ENST00000439080 KLHL38Q2WGJ6 581 aa16.45■□□□□ 0.22
TARDBP-203ENST00000439080 SLITRK4Q8IW52 837 aa16.45■□□□□ 0.22
TARDBP-203ENST00000439080 NCSTNQ92542 709 aa16.45■□□□□ 0.22
TARDBP-203ENST00000439080 FOPNLQ96NB1 174 aa16.45■□□□□ 0.22
TARDBP-203ENST00000439080 CYTH2Q99418 400 aa16.45■□□□□ 0.22
TARDBP-203ENST00000439080 TMEM9Q9P0T7 183 aa16.45■□□□□ 0.22
TARDBP-203ENST00000439080 TDRKHQ9Y2W6 561 aaKnown RBP16.45■□□□□ 0.22
TARDBP-203ENST00000439080 VWA7Q9Y334 891 aa16.45■□□□□ 0.22
TARDBP-203ENST00000439080 NEUROG3Q9Y4Z2 214 aa16.45■□□□□ 0.22
TARDBP-203ENST00000439080 MN1Q10571 1320 aaPredicted RBP16.44■□□□□ 0.22
TARDBP-203ENST00000439080 FAM155BO75949 473 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 CBSLP0DN79 551 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 HOXB3P14651 431 aaPredicted RBP16.44■□□□□ 0.22
TARDBP-203ENST00000439080 SAT1P21673 171 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 CBSP35520 551 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 SKIV2L2P42285 1042 aaKnown RBP16.44■□□□□ 0.22
TARDBP-203ENST00000439080 LIMK2P53671 638 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 PMS2P54278 862 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 INHBCP55103 352 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 GFERP55789 205 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 VSNL1P62760 191 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 ILF2Q12905 390 aaKnown RBP16.44■□□□□ 0.22
TARDBP-203ENST00000439080 SQSTM1Q13501 440 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 WDR74Q6RFH5 385 aaPredicted RBP16.44■□□□□ 0.22
TARDBP-203ENST00000439080 NEK10Q6ZWH5 1172 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 PIWIL4Q7Z3Z4 852 aaKnown RBP16.44■□□□□ 0.22
TARDBP-203ENST00000439080 CACTIN-AS1Q8N1I8 211 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 OR4D9Q8NGE8 314 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 LCN9Q8WX39 176 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 UBXN4Q92575 508 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 NRTNQ99748 197 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 DPYSL5Q9BPU6 564 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 TXLNGYQ9BZA5 131 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 SEMA6CQ9H3T2 930 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 TFB2MQ9H5Q4 396 aaKnown RBP16.44■□□□□ 0.22
TARDBP-203ENST00000439080 POLG2Q9UHN1 485 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 PLAGL1Q9UM63 463 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 ICKQ9UPZ9 632 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 ENTPD2Q9Y5L3 495 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 FREM2Q5SZK8 3169 aa16.44■□□□□ 0.22
TARDBP-203ENST00000439080 SNRNP200O75643 2136 aaKnown RBP16.44■□□□□ 0.22
TARDBP-203ENST00000439080 OR5K3A6NET4 321 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 EIF3FO00303 357 aaPredicted RBP16.43■□□□□ 0.22
TARDBP-203ENST00000439080 MATN4O95460 622 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 ABHD2P08910 425 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 THRAP10827 490 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 MPSTP25325 297 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 CCKBRP32239 447 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 PPP1CAP62136 330 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 SHC2P98077 582 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 ZNF460Q14592 562 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 PHF19Q5T6S3 580 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 GRTP1Q5TC63 336 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 LRRC8EQ6NSJ5 796 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 KLHL35Q6PF15 583 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 PAQR3Q6TCH7 311 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 ZNF574Q6ZN55 896 aaPredicted RBP16.43■□□□□ 0.22
TARDBP-203ENST00000439080 TRMT10CQ7L0Y3 403 aaKnown RBP16.43■□□□□ 0.22
TARDBP-203ENST00000439080 OOSP2Q86WS3 158 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 OR4E2Q8NGC2 313 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 MRRFQ96E11 262 aaKnown RBP16.43■□□□□ 0.22
TARDBP-203ENST00000439080 LINGO1Q96FE5 620 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 CCDC74BQ96LY2 380 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 TMEM74Q96NL1 305 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 GPR22Q99680 433 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 SRMSQ9H3Y6 488 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 XKR8Q9H6D3 395 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 CIDEBQ9UHD4 219 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 ANGPTL2Q9UKU9 493 aa16.43■□□□□ 0.22
TARDBP-203ENST00000439080 MTO1Q9Y2Z2 717 aaKnown RBP16.43■□□□□ 0.22
TARDBP-203ENST00000439080 ANKRD12Q6UB98 2062 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms