RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 MAGEB10Q96LZ2 347 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 ZSCAN5AQ9BUG6 496 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 TRMT61BQ9BVS5 477 aaKnown RBP11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 ARNT2Q9HBZ2 717 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 GJB3O75712 270 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 KRT8P05787 483 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 ATP1B2P14415 290 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 UQCRBP14927 111 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 PSMB9P28065 219 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 SERPINB1P30740 379 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 TIE1P35590 1138 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 MADCAM1Q13477 382 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 TP53BP2Q13625 1128 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 C17orf64Q86WR6 236 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 RGL4Q8IZJ4 473 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 HDDC3Q8N4P3 179 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 LPGAT1Q92604 370 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 TCEAL4Q96EI5 215 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 CCDC3Q9BQI4 270 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 UGT2B28Q9BY64 529 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 BLOC1S6Q9UL45 172 aa11.36□□□□□ -0.59
TRAPPC9-202ENST00000438773 ISM1B1AKI9 464 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 SCAMP1O15126 338 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 LDB2O43679 373 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 SNNO75324 88 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 AOC1P19801 751 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 MAGEA3P43357 314 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 ACTRT2Q8TDY3 377 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 POMPQ9Y244 141 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 DHRS7Q9Y394 339 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 SPACA6W5XKT8 324 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 NUMA1Q14980 2115 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 RB1P06400 928 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 HOXD9P28356 352 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 AGTR2P50052 363 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 HMGCS1Q01581 520 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 TUBB3Q13509 450 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 DHCR24Q15392 516 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 ZNF678Q5SXM1 525 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 REP15Q6BDI9 236 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 CHST15Q7LFX5 561 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 TPD52L3Q96J77 140 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 SMIM14Q96QK8 99 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 ATAD3AQ9NVI7 634 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 DHRS12A0PJE2 317 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 C16orf96A6NNT2 1141 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 H0Y858 1186 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 STX16-NPEPL1H3BU86 382 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 MMP20O60882 483 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 BCL10O95999 233 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 LSAMPQ13449 338 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 MRPL58Q14197 206 aaKnown RBP11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 FAM91A1Q658Y4 838 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 ZNF549Q6P9A3 640 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 PATL1Q86TB9 770 aaKnown RBP11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 PQLC1Q8N2U9 271 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 BEND7Q8N7W2 519 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 NUS1Q96E22 293 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 KCNA7Q96RP8 456 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 FBRSL1Q9HCM7 1045 aaKnown RBP11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 HSFX1Q9UBD0 423 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 HIDE1A8MVS5 230 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 SRCP12931 536 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 CD1DP15813 335 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 RFX3P48380 749 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 CDKN1CP49918 316 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 PSMD7P51665 324 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 DNAJB13P59910 316 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 CYP4F2P78329 520 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 BNIP2Q12982 314 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 CEP68Q76N32 757 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 TSPAN33Q86UF1 283 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 ATG16L2Q8NAA4 619 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 OR9I1Q8NGQ6 314 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 ANKRD49Q8WVL7 239 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 OTUB1Q96FW1 271 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 QRFPRQ96P65 431 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 BBS4Q96RK4 519 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 POPDC3Q9HBV1 291 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 TBX21Q9UL17 535 aa11.35□□□□□ -0.59
TRAPPC9-202ENST00000438773 EDDM13A0A1B0GTR0 161 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 KRT75O95678 551 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 GSNP06396 782 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 HOXC13P31276 330 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 MAPK9P45984 424 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 TLR1Q15399 786 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 RALGPS2Q86X27 583 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 ACVR1CQ8NER5 493 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 BCL7CQ8WUZ0 217 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 NSUN5Q96P11 429 aaKnown RBP11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 PLEKHG4BQ96PX9 1271 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 MTERF1Q99551 399 aaKnown RBP11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 ZDHHC4Q9NPG8 344 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 AASDHPPTQ9NRN7 309 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 GIMAP2Q9UG22 337 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 TRBV23OR9-2A0A075B6M9 112 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 LOC285095A0A1B0GVY8 99 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 LRRC14BA6NHZ5 514 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 TTC34A8MYJ7 566 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 MUSKO15146 869 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms