RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 D2HGDHQ8N465 521 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 RNF214Q8ND24 703 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 ACVR1CQ8NER5 493 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 OR2L2Q8NH16 312 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 ZFPM2Q8WW38 1151 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 ALS2CR12Q96Q35 445 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 COPS8Q99627 209 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 APOL2Q9BQE5 337 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 HEMGNQ9BXL5 484 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 TLR10Q9BXR5 811 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 SLC29A3Q9BZD2 475 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 TSPY26PQ9H489 355 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 KCND1Q9NSA2 647 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 PADI2Q9Y2J8 665 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 AAR2Q9Y312 384 aaKnown RBP7.56□□□□□ -1.2
VPS50-204ENST00000438395 ALG6Q9Y672 507 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 ARL5AQ9Y689 179 aa7.56□□□□□ -1.2
VPS50-204ENST00000438395 ZFC3H1O60293 1989 aaKnown RBP7.55□□□□□ -1.2
VPS50-204ENST00000438395 CCDC66A2RUB6 948 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 TMEM150CB9EJG8 249 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 KCNN4O15554 427 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 DNAJB5O75953 348 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 SRP72O76094 671 aaKnown RBP7.55□□□□□ -1.2
VPS50-204ENST00000438395 AGTP01019 485 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 CYLC1P35663 651 aaPredicted RBP7.55□□□□□ -1.2
VPS50-204ENST00000438395 CCL11P51671 97 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 RRADP55042 308 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 EIF3EP60228 445 aaKnown RBP7.55□□□□□ -1.2
VPS50-204ENST00000438395 RPS18P62269 152 aaKnown RBP7.55□□□□□ -1.2
VPS50-204ENST00000438395 SRSF1Q07955 248 aaKnown RBP eCLIP7.55□□□□□ -1.2
VPS50-204ENST00000438395 ADCY2Q08462 1091 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 CHAF1BQ13112 559 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 SEMA5AQ13591 1074 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 TCEAL1Q15170 157 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 TAZQ16635 292 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 FAM199XQ6PEV8 388 aaPredicted RBP7.55□□□□□ -1.2
VPS50-204ENST00000438395 SARM1Q6SZW1 724 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 ARHGEF18Q6ZSZ5 1173 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 TAS2R42Q7RTR8 314 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 RAB43Q86YS6 212 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 CFAP206Q8IYR0 622 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 GPR135Q8IZ08 494 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 OR4E2Q8NGC2 313 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 OR4K2Q8NGD2 314 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 MIB2Q96AX9 1013 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 RMDN2Q96LZ7 410 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 FERD3LQ96RJ6 166 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 C17orf62Q9BQA9 187 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 ING2Q9H160 280 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 CHST8Q9H2A9 424 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 GOLPH3Q9H4A6 298 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 ACTR5Q9H9F9 607 aaPredicted RBP7.55□□□□□ -1.2
VPS50-204ENST00000438395 SYTL2Q9HCH5 934 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 LATS2Q9NRM7 1088 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 C1GALT1Q9NS00 363 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 IRAK4Q9NWZ3 460 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 SEMA5BQ9P283 1151 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 SERTAD3Q9UJW9 196 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 POMT2Q9UKY4 750 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 FARSAQ9Y285 508 aaKnown RBP7.55□□□□□ -1.2
VPS50-204ENST00000438395 ZNF451Q9Y4E5 1061 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 TEX15Q9BXT5 2789 aa7.55□□□□□ -1.2
VPS50-204ENST00000438395 GOLGA6L9A6NEM1 432 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 SLC9B1P1A6NJY1 282 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 C2orf74A8MZ97 194 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 F8W8V4 182 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 PJA2O43164 708 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 KDM1AO60341 852 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 DPM1O60762 260 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 TJP3O95049 919 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 GAS8O95995 478 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 ALPPP05187 535 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 HBQ1P09105 142 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 FURINP09958 794 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 RBP3P10745 1247 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 EPXP11678 715 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 AGXTP21549 392 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 COL8A1P27658 744 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 PSMB4P28070 264 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 RBL1P28749 1068 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 MARCKSL1P49006 195 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 PRLHRP49683 370 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 KPNA2P52292 529 aaKnown RBP7.54□□□□□ -1.2
VPS50-204ENST00000438395 HADHBP55084 474 aaKnown RBP7.54□□□□□ -1.2
VPS50-204ENST00000438395 ITGA1P56199 1179 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 TMPRSS15P98073 1019 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 GPS2Q13227 327 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 IL10RAQ13651 578 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 PTPRCAPQ14761 206 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 KYNUQ16719 465 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 GPR33Q49SQ1 333 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 SYTL3Q4VX76 610 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 ZRANB3Q5FWF4 1079 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 FHL5Q5TD97 284 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 CPZQ66K79 652 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 CERS6Q6ZMG9 384 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 SYTL1Q8IYJ3 562 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 NXPE1Q8N323 547 aa7.54□□□□□ -1.2
VPS50-204ENST00000438395 ENDOVQ8N8Q3 282 aaKnown RBP7.54□□□□□ -1.2
VPS50-204ENST00000438395 GALNT11Q8NCW6 608 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms