RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ADGRF2Q8IZF7 708 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 TTC39CQ8N584 583 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 LINC00612Q8N6U2 182 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 OR2T12Q8NG77 320 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 PPP1R13BQ96KQ4 1090 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 C1orf74Q96LT6 269 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 SEPT5Q99719 369 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 BARD1Q99728 777 aaKnown RBP2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 NCAPGQ9BPX3 1015 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 RTP3Q9BQQ7 232 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 PIGQQ9BRB3 760 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 SDF4Q9BRK5 362 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 KAT14Q9H8E8 782 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 KIF9Q9HAQ2 790 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 RRP7BPQ9NSQ0 103 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 HAUS2Q9NVX0 235 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 COQ3Q9NZJ6 369 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 UBA2Q9UBT2 640 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 KLK13Q9UKR3 277 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 CORO1CQ9ULV4 474 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 MOB4Q9Y3A3 225 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 RABGAP1Q9Y3P9 1069 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 SESN1Q9Y6P5 492 aa2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 DNMT1P26358 1616 aaKnown RBP2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 CEP170BQ9Y4F5 1589 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P31-201ENST00000437242 ATP10AO60312 1499 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 TCOF1Q13428 1488 aaKnown RBP2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 MROH2AA6NES4 1674 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 FRMD3A2A2Y4 597 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 AGAP14A8MT82 685 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 VILLO15195 856 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 WISP2O76076 250 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 CSPG5O95196 566 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 RAF1P04049 648 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 LDHCP07864 332 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 ACTN1P12814 892 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 IL7RP16871 459 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 TMEM11P17152 192 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 CEBPBP17676 345 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 F2RL1P55085 397 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 CREB5Q02930 508 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 LRMPQ12912 555 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 EPS8Q12929 822 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 CUL4AQ13619 759 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 DUSP28Q4G0W2 176 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 TMED8Q6PL24 325 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 PAQR6Q6TCH4 344 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 SEPT14Q6ZU15 432 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 WDTC1Q8N5D0 677 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 OR1J2Q8NGS2 313 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 OR14L1PQ8NHC6 308 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 FAM120BQ96EK7 910 aaKnown RBP2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 RSRC1Q96IZ7 334 aaKnown RBP2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 CMTM3Q96MX0 182 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 C1QTNF1Q9BXJ1 281 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 GHITMQ9H3K2 345 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 POLR1BQ9H9Y6 1135 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 RANGRFQ9HD47 186 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 CWC15Q9P013 229 aaKnown RBP2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 MAU2Q9Y6X3 613 aa2.77□□□□□ -1.97
HMGB1P31-201ENST00000437242 PLCH2O75038 1416 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 PRAG1Q86YV5 1406 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 SCAPERQ9BY12 1400 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 CDC42BPAQ5VT25 1732 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 ZC3H13Q5T200 1668 aaKnown RBP2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 ZNF644Q9H582 1327 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 PTGES3LE9PB15 166 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 PLK4O00444 970 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 GPR137BO60478 399 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 JRKO75564 520 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 GFPT2O94808 682 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 NKX2-2O95096 273 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 OR2C1O95371 312 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 BMP10O95393 424 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 HSP90AA1P07900 732 aaKnown RBP2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 CSH1P0DML2 217 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 CSH2P0DML3 217 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 RARGP13631 454 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 PRG2P13727 222 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 MMP15P51511 669 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 CTSCP53634 463 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 CDH8P55286 799 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 MRPS34P82930 218 aaKnown RBP2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 MC1RQ01726 317 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 CEBPZQ03701 1054 aaKnown RBP2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 CDC16Q13042 620 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 GRAPQ13588 217 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 HNRNPDQ14103 355 aaKnown RBP2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 WTAPQ15007 396 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 RRS1Q15050 365 aaKnown RBP2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 CTU2Q2VPK5 515 aaKnown RBP2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 GKAP1Q5VSY0 366 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 LCN10Q6JVE6 187 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 TEX11Q8IYF3 940 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 SLC5A8Q8N695 610 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 C1orf52Q8N6N3 182 aaKnown RBP2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 C1orf131Q8NDD1 294 aaKnown RBP2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 OR2L2Q8NH16 312 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 MOAP1Q96BY2 351 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 SLC47A1Q96FL8 570 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms