RNA–Protein interactions for RNA: ENST00000437111.1

SHQ1P1-201, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor pseudogene 1, humanhuman

BASIC

Gene SHQ1P1, Length 1,544 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1P1-201ENST00000437111 LHX3Q9UBR4 397 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 EBF1Q9UH73 591 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 POLG2Q9UHN1 485 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 FKBPLQ9UIM3 349 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 CRLS1Q9UJA2 301 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 CNOT11Q9UKZ1 510 aaKnown RBP6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 SARDHQ9UL12 918 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 SPO11Q9Y5K1 396 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 PLXNA2O75051 1894 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 TENM4Q6N022 2769 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 C1orf232A0A0U1RR37 186 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 A0A1W2PRU2 124 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 CAPN8A6NHC0 703 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 CCL22O00626 93 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 TXNDC9O14530 226 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 BUD23O43709 281 aaKnown RBP6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 KATNA1O75449 491 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 GMNNO75496 209 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 CDK14O94921 469 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 PRAMEF1O95521 474 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 APBB3O95704 486 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 OTCP00480 354 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 EGFP01133 1207 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 NPPAP01160 153 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 TRBC1P01850 177 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 C8BP07358 591 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 CBSLP0DN79 551 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 ENGP17813 658 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 HDCP19113 662 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 PSMA4P25789 261 aaKnown RBP6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 PEX2P28328 305 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 HMOX2P30519 316 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 CBSP35520 551 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 SPAM1P38567 509 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 CSKP41240 450 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 CCR10P46092 362 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 DHPSP49366 369 aaPredicted RBP6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 DGKEP52429 567 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 SLC7A9P82251 487 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 MRPS22P82650 360 aaKnown RBP6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 GRSF1Q12849 480 aaKnown RBP eCLIP6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 TRAF2Q12933 501 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 SEMA3AQ14563 771 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 OR4D1Q15615 310 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 TSNQ15631 228 aaKnown RBP6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 ITPRIPL2Q3MIP1 535 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 PDCD4Q53EL6 469 aaKnown RBP6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 ARHGAP15Q53QZ3 475 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 TRIM61Q5EBN2 209 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 CLEC6AQ6EIG7 209 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 ZNF549Q6P9A3 640 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 PAQR3Q6TCH7 311 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 ATG14Q6ZNE5 492 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 LARP4Q71RC2 724 aaKnown RBP eCLIP6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 DNAJB7Q7Z6W7 309 aaPredicted RBP6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 DHFR2Q86XF0 187 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 TMC8Q8IU68 726 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 GALNT13Q8IUC8 556 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 TCAIMQ8N3R3 496 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 TTC30BQ8N4P2 665 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 AADATQ8N5Z0 425 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 MDGA1Q8NFP4 955 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 TNIP2Q8NFZ5 429 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 CD200R1Q8TD46 325 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 TRPC4APQ8TEL6 797 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 ZNF483Q8TF39 744 aaPredicted RBP6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 SPDL1Q96EA4 605 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 PDLIM5Q96HC4 596 aaKnown RBP6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 MARK4Q96L34 752 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 UBL7Q96S82 380 aaPredicted RBP6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 ZNF382Q96SR6 550 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 ZBTB18Q99592 522 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 NPAS2Q99743 824 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 FEM1AQ9BSK4 669 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 HGH1Q9BTY7 390 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 TPSD1Q9BZJ3 242 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 CEP44Q9C0F1 390 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 ZFYVE1Q9HBF4 777 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 FBRSL1Q9HCM7 1045 aaKnown RBP6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 SARS2Q9NP81 518 aaKnown RBP6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 SMPD4Q9NXE4 827 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 OBP2AQ9NY56 170 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 ZIM2Q9NZV7 527 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 NDUFA13Q9P0J0 144 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 VPS51Q9UID3 782 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 LEF1Q9UJU2 399 aaPredicted RBP6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 PCTPQ9UKL6 214 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 AP3M1Q9Y2T2 418 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 KCTD3Q9Y597 815 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 ANGPTL3Q9Y5C1 460 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 PCDHB9Q9Y5E1 797 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 PCDHGC4Q9Y5F7 938 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 CPQQ9Y646 472 aa6.2□□□□□ -1.42
SHQ1P1-201ENST00000437111 UNC79Q9P2D8 2635 aa6.19□□□□□ -1.42
SHQ1P1-201ENST00000437111 KIAA1549LQ6ZVL6 1849 aa6.19□□□□□ -1.42
SHQ1P1-201ENST00000437111 KIF26AQ9ULI4 1882 aaPredicted RBP6.19□□□□□ -1.42
SHQ1P1-201ENST00000437111 URB1O60287 2271 aaKnown RBP6.19□□□□□ -1.42
SHQ1P1-201ENST00000437111 GLYATL1P3A0A0U1RQE8 302 aa6.19□□□□□ -1.42
SHQ1P1-201ENST00000437111 TTC24A2A3L6 582 aaPredicted RBP6.19□□□□□ -1.42
SHQ1P1-201ENST00000437111 C2orf78A6NCI8 922 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms