RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 AMIGO1Q86WK6 493 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CCDC50Q8IVM0 306 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CDKL3Q8IVW4 592 aaPredicted RBP10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 C19orf47Q8N9M1 422 aaKnown RBP10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CLIP3Q96DZ5 547 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 DNAJC1Q96KC8 554 aaKnown RBP10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 GBP5Q96PP8 586 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 BARD1Q99728 777 aaKnown RBP10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 HEMGNQ9BXL5 484 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 FAM60AQ9NP50 221 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ZDHHC3Q9NYG2 299 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ACTR10Q9NZ32 417 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ICKQ9UPZ9 632 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 PADI2Q9Y2J8 665 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 MED13Q9UHV7 2174 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 TEX15Q9BXT5 2789 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CCDC66A2RUB6 948 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 C2orf74A8MZ97 194 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 C9J4A7 227 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 H7C0C1 242 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 IFRD1O00458 451 aaPredicted RBP10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CCL22O00626 93 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 HCRTR1O43613 425 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 HBQ1P09105 142 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ACADLP28330 430 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 GCGRP47871 477 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ATP5OP48047 213 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CDKN1CP49918 316 aaPredicted RBP10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 KRT33BQ14525 404 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 RHBDD2Q6NTF9 364 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 RAB43Q86YS6 212 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 PIANPQ8IYJ0 282 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 TC2NQ8N9U0 490 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CCDC110Q8TBZ0 833 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 PROKR1Q8TCW9 393 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 TFGQ92734 400 aaPredicted RBP10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 PPP1R2P1Q96PQ5 205 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 FERD3LQ96RJ6 166 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 TBL1YQ9BQ87 522 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 C17orf62Q9BQA9 187 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 HGH1Q9BTY7 390 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 FAM96AQ9H5X1 160 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 VPS37BQ9H9H4 285 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 LUZP4Q9P127 313 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 C5AR2Q9P296 337 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 SERTAD3Q9UJW9 196 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 G3BP2Q9UN86 482 aaKnown RBP10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 TFR2Q9UP52 801 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 HIVEP3Q5T1R4 2406 aa10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 TNRC6AQ8NDV7 1962 aaKnown RBP10.59□□□□□ -0.71
SPTLC1P4-201ENST00000435997 AKR1B15C9JRZ8 316 aaPredicted RBP10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 ZNF185O15231 689 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 KCNN4O15554 427 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 CNOT3O75175 753 aaKnown RBP10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 AP2A2O94973 939 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 DDAH2O95865 285 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 PRSS56P0CW18 603 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 TPBGLP0DKB5 382 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 RBP3P10745 1247 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 UGT2B7P16662 529 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 CTNNA2P26232 953 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 MAGEA1P43355 309 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 SOX8P57073 446 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 EIF3EP60228 445 aaKnown RBP10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 TMPRSS15P98073 1019 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 PRPSAP1Q14558 356 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 DBN1Q16643 649 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 CRB2Q5IJ48 1285 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 DCAF10Q5QP82 559 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 MRPL14Q6P1L8 145 aaKnown RBP10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 PACS1Q6VY07 963 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 SERPINA9Q86WD7 417 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 CLDN19Q8N6F1 224 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 SNRNP40Q96DI7 357 aaKnown RBP10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 TCTN2Q96GX1 697 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 IP6K3Q96PC2 410 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 OR2A14Q96R47 310 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 SLC29A3Q9BZD2 475 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 OSBPL8Q9BZF1 889 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 KLHL25Q9H0H3 589 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 XKR8Q9H6D3 395 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 SLAMF7Q9NQ25 335 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 NLE1Q9NVX2 485 aaPredicted RBP10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 ERRFI1Q9UJM3 462 aaPredicted RBP10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 PCDHA3Q9Y5H8 950 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 PCDHA13Q9Y5I0 950 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 AP1M2Q9Y6Q5 423 aa10.58□□□□□ -0.72
SPTLC1P4-201ENST00000435997 MYO9AB2RTY4 2548 aa10.57□□□□□ -0.72
SPTLC1P4-201ENST00000435997 MACROD2A1Z1Q3 448 aa10.57□□□□□ -0.72
SPTLC1P4-201ENST00000435997 RCCD1A6NED2 376 aa10.57□□□□□ -0.72
SPTLC1P4-201ENST00000435997 A6NL46 340 aa10.57□□□□□ -0.72
SPTLC1P4-201ENST00000435997 LIN7AO14910 233 aaPredicted RBP10.57□□□□□ -0.72
SPTLC1P4-201ENST00000435997 ZSCAN9O15535 394 aaPredicted RBP10.57□□□□□ -0.72
SPTLC1P4-201ENST00000435997 ZNF189O75820 626 aaPredicted RBP10.57□□□□□ -0.72
SPTLC1P4-201ENST00000435997 OR2B3O76000 313 aa10.57□□□□□ -0.72
SPTLC1P4-201ENST00000435997 CBX6O95503 412 aa10.57□□□□□ -0.72
SPTLC1P4-201ENST00000435997 CLDN1O95832 211 aa10.57□□□□□ -0.72
SPTLC1P4-201ENST00000435997 LDLRP01130 860 aa10.57□□□□□ -0.72
SPTLC1P4-201ENST00000435997 UMODP07911 640 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms