RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ZNF101Q8IZC7 436 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 PROKR2Q8NFJ6 384 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 IRF7Q92985 503 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 C8orf48Q96LL4 319 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 C17orf62Q9BQA9 187 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 SLC6A15Q9H2J7 730 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 FAM124BQ9H5Z6 455 aaPredicted RBP11.02□□□□□ -0.65
SCN4A-201ENST00000435607 SNX15Q9NRS6 342 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 CD84Q9UIB8 345 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 A8MU76 341 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 TGDSO95455 350 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 INHAP05111 366 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 GABRB2P47870 512 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 NDST2P52849 883 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 CRISP3P54108 245 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 SMARCD3Q6STE5 483 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 CELF5Q8N6W0 485 aaKnown RBP11.02□□□□□ -0.65
SCN4A-201ENST00000435607 LMX1AQ8TE12 382 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 TP53INP1Q96A56 240 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 RGMAQ96B86 450 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 ZNF471Q9BX82 626 aaPredicted RBP11.02□□□□□ -0.65
SCN4A-201ENST00000435607 BACE2Q9Y5Z0 518 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 LRRC7Q96NW7 1537 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 A0A0G2JMP0 313 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 A0A0J9YYE9 177 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 TMEM150BA6NC51 233 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 SAGE2PA6NJ88 616 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 GP1BBP13224 206 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 SLC5A3P53794 718 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 HERV-K104P61576 105 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 GTF2BQ00403 316 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 ZNF676Q8N7Q3 588 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 KCT2Q8NC54 265 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 OR4M2Q8NGB6 313 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 CYP2W1Q8TAV3 490 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 PNPT1Q8TCS8 783 aaKnown RBP11.02□□□□□ -0.65
SCN4A-201ENST00000435607 C16orf58Q96GQ5 468 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 NEDD4LQ96PU5 975 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 PHF12Q96QT6 1004 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 CPQQ9Y646 472 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 TP53I11O14683 189 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 WNT9AO14904 365 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 AHCYL1O43865 530 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 ADH5P11766 374 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 ZNF35P13682 527 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 MAGEA2P43356 314 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 GALK2Q01415 458 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 PRAMEF17Q5VTA0 474 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 MRPL41Q8IXM3 137 aaKnown RBP11.02□□□□□ -0.65
SCN4A-201ENST00000435607 GPR65Q8IYL9 337 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 LHX5Q9H2C1 402 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 CLK4Q9HAZ1 481 aaKnown RBP11.02□□□□□ -0.65
SCN4A-201ENST00000435607 ASB6Q9NWX5 421 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 MED11Q9P086 117 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 SUSD2Q9UGT4 822 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 NENFQ9UMX5 172 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 MYO9BQ13459 2157 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 KAT6AQ92794 2004 aa11.02□□□□□ -0.65
SCN4A-201ENST00000435607 ANKRD63C9JTQ0 380 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 IRAK2O43187 625 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 LIASO43766 372 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 SERPINA6P08185 405 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 CFL1P23528 166 aaKnown RBP11.01□□□□□ -0.65
SCN4A-201ENST00000435607 MBOAT1Q6ZNC8 495 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 FTMTQ8N4E7 242 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 OR10Q1Q8NGQ4 319 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 MCFD2Q8NI22 146 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 UFD1Q92890 307 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 ZDHHC12Q96GR4 267 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 HTR3EA5X5Y0 456 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 MT-CYBP00156 380 aaPredicted RBP11.01□□□□□ -0.65
SCN4A-201ENST00000435607 ALPIP09923 528 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 SCNN1AP37088 669 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 NCBP2P52298 156 aaKnown RBP eCLIP11.01□□□□□ -0.65
SCN4A-201ENST00000435607 RPS3AP61247 264 aaKnown RBP11.01□□□□□ -0.65
SCN4A-201ENST00000435607 TEX44Q53QW1 395 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 INTS6LQ5JSJ4 861 aaKnown RBP11.01□□□□□ -0.65
SCN4A-201ENST00000435607 GDF6Q6KF10 455 aaPredicted RBP11.01□□□□□ -0.65
SCN4A-201ENST00000435607 ZNF627Q7L945 461 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 ARHGAP12Q8IWW6 846 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 NAT14Q8WUY8 206 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 MR1Q95460 341 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 SAMD11Q96NU1 681 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 CD248Q9HCU0 757 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 RFTN1Q14699 578 aaPredicted RBP11.01□□□□□ -0.65
SCN4A-201ENST00000435607 PDK4Q16654 411 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 LACTB2Q53H82 288 aaPredicted RBP11.01□□□□□ -0.65
SCN4A-201ENST00000435607 ALDH16A1Q8IZ83 802 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 NECAB3Q96P71 396 aaPredicted RBP11.01□□□□□ -0.65
SCN4A-201ENST00000435607 ACBD6Q9BR61 282 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 ITM2CQ9NQX7 267 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 POLR3BQ9NW08 1133 aaPredicted RBP11.01□□□□□ -0.65
SCN4A-201ENST00000435607 SPATA6Q9NWH7 488 aaPredicted RBP11.01□□□□□ -0.65
SCN4A-201ENST00000435607 TAS2R14Q9NYV8 317 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 WASF2Q9Y6W5 498 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 TP73O15350 636 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 UGT1A3P35503 534 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 RFX5P48382 616 aaPredicted RBP11.01□□□□□ -0.65
SCN4A-201ENST00000435607 RTP1P59025 263 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 CYP4F8P98187 520 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms