RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 ZNF470Q6ECI4 717 aa15.8■□□□□ 0.12
SMPD4-207ENST00000435455 SYT10Q6XYQ8 523 aa15.8■□□□□ 0.12
SMPD4-207ENST00000435455 KRT222Q8N1A0 295 aa15.8■□□□□ 0.12
SMPD4-207ENST00000435455 SIDT2Q8NBJ9 832 aaKnown RBP15.8■□□□□ 0.12
SMPD4-207ENST00000435455 OR52E1Q8NGJ3 308 aa15.8■□□□□ 0.12
SMPD4-207ENST00000435455 OR5AR1Q8NGP9 310 aa15.8■□□□□ 0.12
SMPD4-207ENST00000435455 OR5K2Q8NHB8 316 aa15.8■□□□□ 0.12
SMPD4-207ENST00000435455 GABPB2Q8TAK5 448 aaPredicted RBP15.8■□□□□ 0.12
SMPD4-207ENST00000435455 PMEPA1Q969W9 287 aa15.8■□□□□ 0.12
SMPD4-207ENST00000435455 SNF8Q96H20 258 aa15.8■□□□□ 0.12
SMPD4-207ENST00000435455 SLC41A2Q96JW4 573 aa15.8■□□□□ 0.12
SMPD4-207ENST00000435455 BIRC8Q96P09 236 aa15.8■□□□□ 0.12
SMPD4-207ENST00000435455 CCNL2Q96S94 520 aaPredicted RBP15.8■□□□□ 0.12
SMPD4-207ENST00000435455 MAP3K3Q99759 626 aa15.8■□□□□ 0.12
SMPD4-207ENST00000435455 TRIM56Q9BRZ2 755 aaKnown RBP15.8■□□□□ 0.12
SMPD4-207ENST00000435455 CDYLQ9Y232 598 aa15.8■□□□□ 0.12
SMPD4-207ENST00000435455 SLCO2B1O94956 709 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 FMO4P31512 558 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 SHMT2P34897 504 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 ARL4DP49703 201 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 ATP1A2P50993 1020 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 FOXM1Q08050 763 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 UNC5DQ6UXZ4 953 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 CENPUQ71F23 418 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 OTOAQ7RTW8 1153 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 AMIGO1Q86WK6 493 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 DTX1Q86Y01 620 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 PDIK1LQ8N165 341 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 AGGF1Q8N302 714 aaeCLIP15.79■□□□□ 0.12
SMPD4-207ENST00000435455 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.79■□□□□ 0.12
SMPD4-207ENST00000435455 KRT12Q99456 494 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 EBNA1BP2Q99848 306 aaKnown RBP15.79■□□□□ 0.12
SMPD4-207ENST00000435455 CTRCQ99895 268 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 TRIM51Q9BSJ1 452 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 PRORYQ9H606 182 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 APMAPQ9HDC9 416 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 C20orf96Q9NUD7 363 aaPredicted RBP15.79■□□□□ 0.12
SMPD4-207ENST00000435455 WDR70Q9NW82 654 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 POMT2Q9UKY4 750 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 FAM169AQ9Y6X4 670 aa15.79■□□□□ 0.12
SMPD4-207ENST00000435455 MGAQ8IWI9 3026 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 GSAPA4D1B5 854 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 EFCAB8A8MWE9 144 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 BTN3A1O00481 513 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 SEC31AO94979 1220 aaKnown RBP15.78■□□□□ 0.12
SMPD4-207ENST00000435455 ZBTB11O95625 1053 aaPredicted RBP15.78■□□□□ 0.12
SMPD4-207ENST00000435455 S1PR4O95977 384 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 PKMP14618 531 aaKnown RBP15.78■□□□□ 0.12
SMPD4-207ENST00000435455 KPNA2P52292 529 aaKnown RBP15.78■□□□□ 0.12
SMPD4-207ENST00000435455 CXADRP78310 365 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 HSD11B2P80365 405 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 DHX9Q08211 1270 aaKnown RBP15.78■□□□□ 0.12
SMPD4-207ENST00000435455 CRYMQ14894 314 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 TGIF1Q15583 401 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 BBS9Q3SYG4 887 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 CTSL3PQ5NE16 218 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 HIBCHQ6NVY1 386 aaPredicted RBP15.78■□□□□ 0.12
SMPD4-207ENST00000435455 MAATS1Q7Z4T9 603 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 VRK3Q8IV63 474 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 SPATA4Q8NEY3 305 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 LRRC39Q96DD0 335 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 CRELD1Q96HD1 420 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 OR6C1Q96RD1 312 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 FAM167BQ9BTA0 163 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 CCDC68Q9H2F9 335 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 C1GALT1Q9NS00 363 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 IL1RAPL1Q9NZN1 696 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 OR6C2Q9NZP2 312 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 ICKQ9UPZ9 632 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 CRYL1Q9Y2S2 319 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 TDRKHQ9Y2W6 561 aaKnown RBP15.78■□□□□ 0.12
SMPD4-207ENST00000435455 MRFAP1Q9Y605 127 aa15.78■□□□□ 0.12
SMPD4-207ENST00000435455 FAM187AA6NFU0 413 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 C2orf74A8MZ97 194 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 E5RI56 91 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 CDH3P22223 829 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 ITGA8P53708 1063 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 ARL4CP56559 192 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 SH3BP2P78314 561 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 ACY1Q03154 408 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 VAC14Q08AM6 782 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 ABRQ12979 859 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 MSS51Q4VC12 460 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 SPANXN3Q5MJ09 141 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 MANEAQ5SRI9 462 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 TMTC4Q5T4D3 741 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 TTC23LQ6PF05 361 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 CCDC81Q6ZN84 652 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 GPR155Q7Z3F1 870 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 KCNMB4Q86W47 210 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 DCUN1D3Q8IWE4 304 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 ADGRF3Q8IZF5 1079 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 FOPNLQ96NB1 174 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 TRIM31Q9BZY9 425 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 SPRY4Q9C004 299 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 XKR8Q9H6D3 395 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 CPNE5Q9HCH3 593 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 PDE7BQ9NP56 450 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 LATS2Q9NRM7 1088 aa15.77■□□□□ 0.12
SMPD4-207ENST00000435455 FBXO5Q9UKT4 447 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms