RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 UTP6Q9NYH9 597 aaKnown RBP17.82■□□□□ 0.44
HMGN1-206ENST00000431390 SLC23A2Q9UGH3 650 aa17.82■□□□□ 0.44
HMGN1-206ENST00000431390 SUFUQ9UMX1 484 aa17.82■□□□□ 0.44
HMGN1-206ENST00000431390 PRKAB1Q9Y478 270 aa17.82■□□□□ 0.44
HMGN1-206ENST00000431390 CEP192Q8TEP8 1941 aa17.82■□□□□ 0.44
HMGN1-206ENST00000431390 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.81■□□□□ 0.44
HMGN1-206ENST00000431390 PRSS38A1L453 326 aa17.81■□□□□ 0.44
HMGN1-206ENST00000431390 PABPN1LA6NDY0 278 aaKnown RBP17.81■□□□□ 0.44
HMGN1-206ENST00000431390 LYPLA1O75608 230 aaPredicted RBP17.81■□□□□ 0.44
HMGN1-206ENST00000431390 HSPA4LO95757 839 aa17.81■□□□□ 0.44
HMGN1-206ENST00000431390 PDHA2P29803 388 aa17.81■□□□□ 0.44
HMGN1-206ENST00000431390 ARRB2P32121 409 aa17.81■□□□□ 0.44
HMGN1-206ENST00000431390 RPIAP49247 311 aa17.81■□□□□ 0.44
HMGN1-206ENST00000431390 THOP1P52888 689 aa17.81■□□□□ 0.44
HMGN1-206ENST00000431390 AP1S2P56377 157 aa17.81■□□□□ 0.44
HMGN1-206ENST00000431390 DMWDQ09019 674 aa17.81■□□□□ 0.44
HMGN1-206ENST00000431390 GALNT1Q10472 559 aaPredicted RBP17.81■□□□□ 0.44
HMGN1-206ENST00000431390 GKAP1Q5VSY0 366 aaPredicted RBP17.81■□□□□ 0.44
HMGN1-206ENST00000431390 METRNLQ641Q3 311 aa17.81■□□□□ 0.44
HMGN1-206ENST00000431390 ENPP7Q6UWV6 458 aa17.81■□□□□ 0.44
HMGN1-206ENST00000431390 FRMD7Q6ZUT3 714 aa17.81■□□□□ 0.44
HMGN1-206ENST00000431390 NETO1Q8TDF5 533 aa17.81■□□□□ 0.44
HMGN1-206ENST00000431390 ELAC2Q9BQ52 826 aaKnown RBP17.81■□□□□ 0.44
HMGN1-206ENST00000431390 ZNF395Q9H8N7 513 aaPredicted RBP17.81■□□□□ 0.44
HMGN1-206ENST00000431390 PDE10AQ9Y233 779 aa17.81■□□□□ 0.44
HMGN1-206ENST00000431390 TNPO3Q9Y5L0 923 aaKnown RBP17.81■□□□□ 0.44
HMGN1-206ENST00000431390 ZFC3H1O60293 1989 aaKnown RBP17.81■□□□□ 0.44
HMGN1-206ENST00000431390 MAP1BP46821 2468 aaKnown RBP17.8■□□□□ 0.44
HMGN1-206ENST00000431390 NCF1BA6NI72 391 aaPredicted RBP17.8■□□□□ 0.44
HMGN1-206ENST00000431390 NCF1CA8MVU1 366 aaPredicted RBP17.8■□□□□ 0.44
HMGN1-206ENST00000431390 SNX3O60493 162 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 CATP04040 527 aaKnown RBP17.8■□□□□ 0.44
HMGN1-206ENST00000431390 RETP07949 1114 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 RPS17P08708 135 aaKnown RBP17.8■□□□□ 0.44
HMGN1-206ENST00000431390 HIST1H2AGP0C0S8 130 aaPredicted RBP17.8■□□□□ 0.44
HMGN1-206ENST00000431390 TROVE2P10155 538 aaKnown RBP eCLIP17.8■□□□□ 0.44
HMGN1-206ENST00000431390 NCF1P14598 390 aaPredicted RBP17.8■□□□□ 0.44
HMGN1-206ENST00000431390 HIST1H2ADP20671 130 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 CD27P26842 260 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 RPL6Q02878 288 aaKnown RBP17.8■□□□□ 0.44
HMGN1-206ENST00000431390 ABRQ12979 859 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 SRSF5Q13243 272 aaKnown RBP17.8■□□□□ 0.44
HMGN1-206ENST00000431390 SIM2Q14190 667 aaPredicted RBP17.8■□□□□ 0.44
HMGN1-206ENST00000431390 PTK2BQ14289 1009 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 UNC50Q53HI1 259 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 SULT1C3Q6IMI6 304 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 FAM83HQ6ZRV2 1179 aaPredicted RBP17.8■□□□□ 0.44
HMGN1-206ENST00000431390 Q6ZSR6 202 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 TCAIMQ8N3R3 496 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 FBXO15Q8NCQ5 510 aaPredicted RBP17.8■□□□□ 0.44
HMGN1-206ENST00000431390 MCOLN3Q8TDD5 553 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 SNX19Q92543 992 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 HIST1H2AHQ96KK5 128 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 HIST1H2AJQ99878 128 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 H2AFJQ9BTM1 129 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 OR52A5Q9H2C5 316 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 GSTO2Q9H4Y5 243 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 GPR27Q9NS67 375 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 SEMA4GQ9NTN9 838 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 MOSPD1Q9UJG1 213 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 HAO1Q9UJM8 370 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 PTBP2Q9UKA9 531 aaKnown RBP17.8■□□□□ 0.44
HMGN1-206ENST00000431390 ACSL5Q9ULC5 683 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 LRP4O75096 1905 aa17.8■□□□□ 0.44
HMGN1-206ENST00000431390 SLC30A4O14863 429 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 SUPT7LO94864 414 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 ANXA5P08758 320 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 ACP5P13686 325 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 EEF1DP29692 281 aaKnown RBP17.79■□□□□ 0.44
HMGN1-206ENST00000431390 FNTBP49356 437 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 PCBP2Q15366 365 aaKnown RBP eCLIP17.79■□□□□ 0.44
HMGN1-206ENST00000431390 ST3GAL2Q16842 350 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 ARL13AQ5H913 290 aaPredicted RBP17.79■□□□□ 0.44
HMGN1-206ENST00000431390 ANKS6Q68DC2 871 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 METTL2BQ6P1Q9 378 aaKnown RBP17.79■□□□□ 0.44
HMGN1-206ENST00000431390 ATG14Q6ZNE5 492 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 CHST15Q7LFX5 561 aaPredicted RBP17.79■□□□□ 0.44
HMGN1-206ENST00000431390 SPATA21Q7Z572 469 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 OR13H1Q8NG92 308 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 PIWIL2Q8TC59 973 aaKnown RBP17.79■□□□□ 0.44
HMGN1-206ENST00000431390 UBTD2Q8WUN7 234 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 OR1E3Q8WZA6 343 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 OR2M4Q96R27 311 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 EGFL8Q99944 293 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 TRIM55Q9BYV6 548 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 EML4Q9HC35 981 aaKnown RBP17.79■□□□□ 0.44
HMGN1-206ENST00000431390 MRPL40Q9NQ50 206 aaKnown RBP17.79■□□□□ 0.44
HMGN1-206ENST00000431390 TM7SF3Q9NS93 570 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 KLQ9UEF7 1012 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 DNAJC16Q9Y2G8 782 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.79■□□□□ 0.44
HMGN1-206ENST00000431390 RAP2CQ9Y3L5 183 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 PRR19A6NJB7 356 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 HRO43593 1189 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 SIX3O95343 332 aaPredicted RBP17.79■□□□□ 0.44
HMGN1-206ENST00000431390 GUCA1CO95843 209 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 MAP4P27816 1152 aaKnown RBP17.79■□□□□ 0.44
HMGN1-206ENST00000431390 ACADLP28330 430 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 GNPDA1P46926 289 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 HNMTP50135 292 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms