RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 PLXNA4Q9HCM2 1894 aa8.67□□□□□ -1.02
CDH13-202ENST00000428848 FAM172BPA6NC97 362 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 NCF1BA6NI72 391 aaPredicted RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 NCF1CA8MVU1 366 aaPredicted RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 F8W810 466 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 G3V2T6 193 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 UGT2B11O75310 529 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 KATNA1O75449 491 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 PRLP01236 227 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 SERPINF2P08697 491 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 OR4Q2P0C623 313 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 CHRNB1P11230 501 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 PCNAP12004 261 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 NCF1P14598 390 aaPredicted RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 PKMP14618 531 aaKnown RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 SERPINB1P30740 379 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 CDKN1CP49918 316 aaPredicted RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 PRKCZQ05513 592 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 SMARCB1Q12824 385 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 TOP3AQ13472 1001 aaPredicted RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 PCBP2Q15366 365 aaKnown RBP eCLIP8.66□□□□□ -1.02
CDH13-202ENST00000428848 CTF1Q16619 201 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 MEP1AQ16819 746 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 PTPRNQ16849 979 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 ATAD3BQ5T9A4 648 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 ENPP6Q6UWR7 440 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 ZBTB46Q86UZ6 589 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 GALNT13Q8IUC8 556 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 PLPP6Q8IY26 295 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 SVOPLQ8N434 492 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 CDYL2Q8N8U2 506 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 OR4K2Q8NGD2 314 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 CHAC2Q8WUX2 184 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 NUDT8Q8WV74 236 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 ZNF566Q969W8 418 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 RHBDF1Q96CC6 855 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 MED30Q96HR3 178 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 C8orf48Q96LL4 319 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 SMURF2Q9HAU4 748 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 LTB4R2Q9NPC1 389 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 SCUBE2Q9NQ36 999 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 VAPAQ9P0L0 249 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 EIF2B4Q9UI10 523 aaKnown RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 GABRQQ9UN88 632 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 PCDHGB1Q9Y5G3 927 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 VWA8A3KMH1 1905 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 OR7A17O14581 309 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 SYN3O14994 580 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 NDUFS3O75489 264 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 OAZ2O95190 189 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 GNRH1P01148 92 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 HOXD9P28356 352 aaPredicted RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 RYKP34925 604 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 GPR15P49685 360 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 CLCN4P51793 760 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 DGKQP52824 942 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 IST1P53990 364 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 GP2P55259 537 aaKnown RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 SP3Q02447 781 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 EFEMP1Q12805 493 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 KCNAB2Q13303 367 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 ZNF235Q14590 738 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 TAF1AQ15573 450 aaPredicted RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 AAK1Q2M2I8 961 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 INAVAQ3KP66 663 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 C5orf22Q49AR2 442 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 SLC39A12Q504Y0 691 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 SDHAF4Q5VUM1 108 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 ZNF691Q5VV52 312 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 ANKRD34AQ69YU3 496 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 CCSAPQ6IQ19 270 aaPredicted RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 CRTC3Q6UUV7 619 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 USP43Q70EL4 1123 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 BTLAQ7Z6A9 289 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 UBE2Q1Q7Z7E8 422 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 ZNF598Q86UK7 904 aaKnown RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 CIR1Q86X95 450 aaPredicted RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 GPSM1Q86YR5 675 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 DCP2Q8IU60 420 aaKnown RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 LACC1Q8IV20 430 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 SCN4BQ8IWT1 228 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 PIANPQ8IYJ0 282 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 CHCHD4Q8N4Q1 142 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 SIDT2Q8NBJ9 832 aaKnown RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 PIK3C3Q8NEB9 887 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 EEF1AKMT1Q8WVE0 214 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 GTF2H4Q92759 462 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 CDK15Q96Q40 435 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 RBM4BQ9BQ04 359 aaKnown RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 RBM4Q9BWF3 364 aaKnown RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 ADNPQ9H2P0 1102 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 ATP13A3Q9H7F0 1226 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 FBXO8Q9NRD0 319 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 PAK1IP1Q9NWT1 392 aaPredicted RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 CRNNQ9UBG3 495 aaPredicted RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 ZMAT5Q9UDW3 170 aaKnown RBP8.66□□□□□ -1.02
CDH13-202ENST00000428848 SATB2Q9UPW6 733 aa8.66□□□□□ -1.02
CDH13-202ENST00000428848 GOLGA8CPA6NN73 597 aa8.65□□□□□ -1.02
CDH13-202ENST00000428848 PSMD11O00231 422 aa8.65□□□□□ -1.02
CDH13-202ENST00000428848 SLC1A7O00341 560 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms