RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 CLCNKAP51800 687 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 SRP54P61011 504 aaKnown RBP11.78□□□□□ -0.52
RFC4-206ENST00000427785 CSTF1Q05048 431 aaKnown RBP11.78□□□□□ -0.52
RFC4-206ENST00000427785 DMPKQ09013 629 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 ARL13AQ5H913 290 aaPredicted RBP11.78□□□□□ -0.52
RFC4-206ENST00000427785 MAMSTRQ6ZN01 415 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 WDR5BQ86VZ2 330 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 CRLF3Q8IUI8 442 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 LSMEM2Q8N112 164 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 CADM4Q8NFZ8 388 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 PPP4R1Q8TF05 950 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 UBTD2Q8WUN7 234 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 RHBDF1Q96CC6 855 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 FOPNLQ96NB1 174 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 SLC12A9Q9BXP2 914 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 ZDHHC5Q9C0B5 715 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 DRC3Q9H069 523 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 TCEAL2Q9H3H9 227 aaPredicted RBP11.78□□□□□ -0.52
RFC4-206ENST00000427785 RDH14Q9HBH5 336 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 PARVBQ9HBI1 364 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 PCTPQ9UKL6 214 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 CFAP20Q9Y6A4 193 aaKnown RBP11.78□□□□□ -0.52
RFC4-206ENST00000427785 DNMT3AQ9Y6K1 912 aaPredicted RBP11.78□□□□□ -0.52
RFC4-206ENST00000427785 TTC28Q96AY4 2481 aa11.78□□□□□ -0.52
RFC4-206ENST00000427785 PRR19A6NJB7 356 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 PDZK1P1A8MUH7 402 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 TMEM233B4DJY2 109 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 TOR1BO14657 336 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 TAPBPO15533 448 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 ANXA5P08758 320 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 IMPDH1P20839 514 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 AK4P27144 223 aaPredicted RBP11.77□□□□□ -0.53
RFC4-206ENST00000427785 MAP4P27816 1152 aaKnown RBP11.77□□□□□ -0.53
RFC4-206ENST00000427785 ACADLP28330 430 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 HOXA6P31267 233 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 RPIAP49247 311 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 CDH13P55290 713 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 PLOD1Q02809 727 aaPredicted RBP11.77□□□□□ -0.53
RFC4-206ENST00000427785 EIF2B5Q13144 721 aaKnown RBP11.77□□□□□ -0.53
RFC4-206ENST00000427785 RPA4Q13156 261 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 PTK2BQ14289 1009 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 FZD2Q14332 565 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 RBBP7Q16576 425 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 ZNF542PQ5EBM4 170 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 METRNLQ641Q3 311 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 SULT1C3Q6IMI6 304 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 SPATA21Q7Z572 469 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 MAML2Q8IZL2 1156 aaPredicted RBP11.77□□□□□ -0.53
RFC4-206ENST00000427785 ZNF781Q8N8C0 355 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 DTWD2Q8NBA8 298 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 OR5AR1Q8NGP9 310 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 CCL4L1Q8NHW4 92 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 RFWD2Q8NHY2 731 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 ZNF483Q8TF39 744 aaPredicted RBP11.77□□□□□ -0.53
RFC4-206ENST00000427785 KLHDC7BQ96G42 594 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 HGH1Q9BTY7 390 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 TRIM54Q9BYV2 358 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 TMEM168Q9H0V1 697 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 DPEP2Q9H4A9 486 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 TM9SF3Q9HD45 589 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 SEMA4BQ9NPR2 832 aaPredicted RBP11.77□□□□□ -0.53
RFC4-206ENST00000427785 PNPOQ9NVS9 261 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 PLAGL1Q9UM63 463 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 ASF1AQ9Y294 204 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 WDR37Q9Y2I8 494 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 FIS1Q9Y3D6 152 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 ST14Q9Y5Y6 855 aa11.77□□□□□ -0.53
RFC4-206ENST00000427785 SPTY2D1-AS1A0A0U1RR47 76 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 A0A1W2PR77 199 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 IFRD1O00458 451 aaPredicted RBP11.76□□□□□ -0.53
RFC4-206ENST00000427785 TNFRSF10CO14798 259 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 SNX3O60493 162 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 CCNT2O60583 730 aaKnown RBP11.76□□□□□ -0.53
RFC4-206ENST00000427785 C1orf105O95561 183 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 CELA2BP08218 269 aaPredicted RBP11.76□□□□□ -0.53
RFC4-206ENST00000427785 HIST1H2AGP0C0S8 130 aaPredicted RBP11.76□□□□□ -0.53
RFC4-206ENST00000427785 TROVE2P10155 538 aaKnown RBP eCLIP11.76□□□□□ -0.53
RFC4-206ENST00000427785 HIST1H2ADP20671 130 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 SERPINB5P36952 375 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 ACTR1BP42025 376 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 GDF5P43026 501 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 MAPK9P45984 424 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 AP1S2P56377 157 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 ACTR1AP61163 376 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 CDKL1Q00532 357 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 CTBSQ01459 385 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 ANKS6Q68DC2 871 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 SLC30A9Q6PML9 568 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 UNC5DQ6UXZ4 953 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 GOLGA7Q7Z5G4 137 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 CUZD1Q86UP6 607 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 PARGQ86W56 976 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 C1orf210Q8IVY1 113 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 PHACTR4Q8IZ21 702 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 RGL4Q8IZJ4 473 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 MCOLN3Q8TDD5 553 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 TRPC4APQ8TEL6 797 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 C10orf82Q8WW14 230 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 HIST1H2AHQ96KK5 128 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 C12orf66Q96MD2 445 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms