RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 PIK3R1P27986 724 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 PDHA2P29803 388 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 CPOXP36551 454 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 CPA2P48052 419 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 ELF3P78545 371 aaPredicted RBP14.85□□□□□ -0.03
ACTB-204ENST00000425660 TDGQ13569 410 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 INPP5AQ14642 412 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 HERC3Q15034 1050 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 IRF4Q15306 451 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 SKIV2LQ15477 1246 aaKnown RBP14.85□□□□□ -0.03
ACTB-204ENST00000425660 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.85□□□□□ -0.03
ACTB-204ENST00000425660 RPLP0P6Q8NHW5 317 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 HM13Q8TCT9 377 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 GANCQ8TET4 914 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 ASB12Q8WXK4 309 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 HLA-CQ95604 372 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 FBXL8Q96CD0 374 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 CDK15Q96Q40 435 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 LGR4Q9BXB1 951 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 CADM1Q9BY67 442 aaKnown RBP14.85□□□□□ -0.03
ACTB-204ENST00000425660 PFDN4Q9NQP4 134 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 POLG2Q9UHN1 485 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 MMP17Q9ULZ9 603 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 TIMM22Q9Y584 194 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 A0A1W2PQU0 124 aa14.84□□□□□ -0.03
ACTB-204ENST00000425660 PABPN1LA6NDY0 278 aaKnown RBP14.84□□□□□ -0.03
ACTB-204ENST00000425660 MGAT4DA6NG13 374 aa14.84□□□□□ -0.03
ACTB-204ENST00000425660 H3BM21 787 aa14.84□□□□□ -0.03
ACTB-204ENST00000425660 POP7O75817 140 aaKnown RBP14.84□□□□□ -0.03
ACTB-204ENST00000425660 CATP04040 527 aaKnown RBP14.84□□□□□ -0.03
ACTB-204ENST00000425660 EBLN1P0CF75 366 aa14.84□□□□□ -0.03
ACTB-204ENST00000425660 EPORP19235 508 aa14.84□□□□□ -0.03
ACTB-204ENST00000425660 ATP4BP51164 291 aa14.84□□□□□ -0.03
ACTB-204ENST00000425660 IRX1P78414 480 aaPredicted RBP14.84□□□□□ -0.03
ACTB-204ENST00000425660 SLC44A4Q53GD3 710 aa14.84□□□□□ -0.03
ACTB-204ENST00000425660 OGFOD2Q6N063 350 aa14.84□□□□□ -0.03
ACTB-204ENST00000425660 TMEM92Q6UXU6 159 aa14.84□□□□□ -0.03
ACTB-204ENST00000425660 HORMAD1Q86X24 394 aa14.84□□□□□ -0.03
ACTB-204ENST00000425660 OXR1Q8N573 874 aa14.84□□□□□ -0.03
ACTB-204ENST00000425660 CDYL2Q8N8U2 506 aa14.84□□□□□ -0.03
ACTB-204ENST00000425660 FBXO27Q8NI29 283 aa14.84□□□□□ -0.03
ACTB-204ENST00000425660 RP9Q8TA86 221 aaKnown RBP14.84□□□□□ -0.03
ACTB-204ENST00000425660 SLC17A9Q9BYT1 436 aa14.84□□□□□ -0.03
ACTB-204ENST00000425660 MMADHCQ9H3L0 296 aaPredicted RBP14.84□□□□□ -0.03
ACTB-204ENST00000425660 WDR26Q9H7D7 661 aa14.84□□□□□ -0.03
ACTB-204ENST00000425660 PCYT1BQ9Y5K3 369 aaPredicted RBP14.84□□□□□ -0.03
ACTB-204ENST00000425660 PTGDR2Q9Y5Y4 395 aa14.84□□□□□ -0.03
ACTB-204ENST00000425660 DNMT3AQ9Y6K1 912 aaPredicted RBP14.84□□□□□ -0.03
ACTB-204ENST00000425660 TRPM6Q9BX84 2022 aa14.84□□□□□ -0.03
ACTB-204ENST00000425660 KLHL33A6NCF5 533 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 CAPN1P07384 714 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 THRAP10827 490 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 COX4I1P13073 169 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 MAP4P27816 1152 aaKnown RBP14.83□□□□□ -0.04
ACTB-204ENST00000425660 CCNG1P51959 295 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 SFSWAPQ12872 951 aaKnown RBP14.83□□□□□ -0.04
ACTB-204ENST00000425660 RPA4Q13156 261 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 SGCGQ13326 291 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 PTK2BQ14289 1009 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 SQLEQ14534 574 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 PTCHD3Q3KNS1 767 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 LEXMQ3ZCV2 418 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 DNAL1Q4LDG9 190 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 CYB5D1Q6P9G0 228 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 MILR1Q7Z6M3 343 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 DDIASQ8IXT1 998 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 KLHDC8AQ8IYD2 350 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 CFAP206Q8IYR0 622 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 POU5F2Q8N7G0 328 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 DCBLD1Q8N8Z6 715 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 METTL6Q8TCB7 284 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 CCDC138Q96M89 665 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 FOPNLQ96NB1 174 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 C1QTNF7Q9BXJ2 289 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 FAM8A1Q9UBU6 413 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 TRPS1Q9UHF7 1281 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 BTRCQ9Y297 605 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 TMEM98Q9Y2Y6 226 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 ANGPTL3Q9Y5C1 460 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 ANKRD12Q6UB98 2062 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 TRIOO75962 3097 aa14.83□□□□□ -0.04
ACTB-204ENST00000425660 MGRN1O60291 552 aa14.82□□□□□ -0.04
ACTB-204ENST00000425660 RNGTTO60942 597 aaKnown RBP14.82□□□□□ -0.04
ACTB-204ENST00000425660 ALDOCP09972 364 aaKnown RBP14.82□□□□□ -0.04
ACTB-204ENST00000425660 LINC00032P0C843 101 aa14.82□□□□□ -0.04
ACTB-204ENST00000425660 NDUFV2P19404 249 aa14.82□□□□□ -0.04
ACTB-204ENST00000425660 PBLDP30039 288 aaPredicted RBP14.82□□□□□ -0.04
ACTB-204ENST00000425660 ACADVLP49748 655 aa14.82□□□□□ -0.04
ACTB-204ENST00000425660 ABRQ12979 859 aa14.82□□□□□ -0.04
ACTB-204ENST00000425660 ATL1Q8WXF7 558 aa14.82□□□□□ -0.04
ACTB-204ENST00000425660 ATP6V1E2Q96A05 226 aa14.82□□□□□ -0.04
ACTB-204ENST00000425660 RTKNQ9BST9 563 aa14.82□□□□□ -0.04
ACTB-204ENST00000425660 NCKAP1Q9Y2A7 1128 aa14.82□□□□□ -0.04
ACTB-204ENST00000425660 ATG2BQ96BY7 2078 aa14.82□□□□□ -0.04
ACTB-204ENST00000425660 LOC100653049A0A140TA62 436 aa14.82□□□□□ -0.04
ACTB-204ENST00000425660 MAN2B1O00754 1011 aa14.82□□□□□ -0.04
ACTB-204ENST00000425660 KRT34O76011 436 aa14.82□□□□□ -0.04
ACTB-204ENST00000425660 C1orf105O95561 183 aa14.82□□□□□ -0.04
ACTB-204ENST00000425660 MYCLP1P12525 358 aaPredicted RBP14.82□□□□□ -0.04
ACTB-204ENST00000425660 HGFP14210 728 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms