RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 ASB8Q9H765 288 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 IPPKQ9H8X2 491 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 ZIM2Q9NZV7 527 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 THEGQ9P2T0 379 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 DPP7Q9UHL4 492 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 EVLQ9UI08 416 aaPredicted RBP10.48□□□□□ -0.73
CUX1-205ENST00000425244 WNT6Q9Y6F9 365 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 CROCCQ5TZA2 2017 aa10.48□□□□□ -0.73
CUX1-205ENST00000425244 ANKRD36A6QL64 1941 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 NEDD8-MDP1E9PL57 170 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 CLOCKO15516 846 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 FFAR2O15552 330 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 BNIP3LO60238 219 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 ASLP04424 464 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 HNRNPA1P09651 372 aaKnown RBP eCLIP10.47□□□□□ -0.73
CUX1-205ENST00000425244 SLC2A4P14672 509 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 VIPR2P41587 438 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 CLCN2P51788 898 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 SELPLGQ14242 412 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 ABRAXAS2Q15018 415 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 ATP6AP1Q15904 470 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 DUSP6Q16828 381 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 AASDHQ4L235 1098 aaPredicted RBP10.47□□□□□ -0.73
CUX1-205ENST00000425244 OTUD3Q5T2D3 398 aaPredicted RBP10.47□□□□□ -0.73
CUX1-205ENST00000425244 INTS11Q5TA45 600 aaKnown RBP10.47□□□□□ -0.73
CUX1-205ENST00000425244 PDE12Q6L8Q7 609 aaKnown RBP10.47□□□□□ -0.73
CUX1-205ENST00000425244 CYP20A1Q6UW02 462 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 MILR1Q7Z6M3 343 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 ADAMTSL2Q86TH1 951 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 TMEM25Q86YD3 366 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 STK40Q8N2I9 435 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 TSPEARQ8WU66 669 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 BIRC7Q96CA5 298 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 PHF12Q96QT6 1004 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 ABCG8Q9H221 673 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 RSL24D1Q9UHA3 163 aaKnown RBP10.47□□□□□ -0.73
CUX1-205ENST00000425244 DHRS7Q9Y394 339 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 A0A0C4DFX4 3053 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 ZFC3H1O60293 1989 aaKnown RBP10.47□□□□□ -0.73
CUX1-205ENST00000425244 CHD5Q8TDI0 1954 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 OR7A17O14581 309 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 RAD51BO15315 384 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 SMAD6O43541 496 aaKnown RBP10.47□□□□□ -0.73
CUX1-205ENST00000425244 LDLRP01130 860 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 PCNAP12004 261 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 FCGR1AP12314 374 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 RPL38P63173 70 aaKnown RBP10.47□□□□□ -0.73
CUX1-205ENST00000425244 CREB5Q02930 508 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 RFTN2Q52LD8 501 aaPredicted RBP10.47□□□□□ -0.73
CUX1-205ENST00000425244 TMTC4Q5T4D3 741 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 SBSNQ6UWP8 590 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 Q6ZNB5 142 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 ZFAND4Q86XD8 727 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 PACRGLQ8N7B6 248 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 NSMCE2Q96MF7 247 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 CHID1Q9BWS9 393 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 P2RY12Q9H244 342 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 WWOXQ9NZC7 414 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 SLC8A2Q9UPR5 921 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 PRSS21Q9Y6M0 314 aa10.47□□□□□ -0.73
CUX1-205ENST00000425244 TCRBV5S2A0A599 114 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 TRMUO75648 421 aaKnown RBP10.46□□□□□ -0.73
CUX1-205ENST00000425244 SLC25A14O95258 325 aaPredicted RBP10.46□□□□□ -0.73
CUX1-205ENST00000425244 RASAL1O95294 804 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 ZNF7P17097 686 aaPredicted RBP10.46□□□□□ -0.73
CUX1-205ENST00000425244 HRH2P25021 359 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 NFKBIAP25963 317 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 HMGCLP35914 325 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 EEFSECP57772 596 aaKnown RBP10.46□□□□□ -0.73
CUX1-205ENST00000425244 NAA20P61599 178 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 GRIK2Q13002 908 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 PTGR1Q14914 329 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 TCEAL5Q5H9L2 206 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 IRAK1BP1Q5VVH5 260 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 GLYATQ6IB77 296 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 HTR3DQ70Z44 454 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 HID1Q8IV36 788 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 MFSD2AQ8NA29 543 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 HJURPQ8NCD3 748 aaPredicted RBP10.46□□□□□ -0.73
CUX1-205ENST00000425244 MYLIPQ8WY64 445 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 ZFYVE19Q96K21 471 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 TNKS2Q9H2K2 1166 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 ZFP14Q9HCL3 533 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 LATS2Q9NRM7 1088 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 ELOVL2Q9NXB9 296 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 TNPO3Q9Y5L0 923 aaKnown RBP10.46□□□□□ -0.73
CUX1-205ENST00000425244 FADS3Q9Y5Q0 445 aa10.46□□□□□ -0.73
CUX1-205ENST00000425244 ATG2AQ2TAZ0 1938 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 ACOX3O15254 700 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 E2F6O75461 281 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 RSL1D1O76021 490 aaKnown RBP10.46□□□□□ -0.74
CUX1-205ENST00000425244 PGLSO95336 258 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 CLDN7O95471 211 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 OTCP00480 354 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 PSMA3P25788 255 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 HOXA9P31269 272 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 GGT5P36269 586 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 RGS4P49798 205 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 HMGCS1Q01581 520 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 PLCL1Q15111 1095 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms