RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 PRKACGP22612 351 aa3.77□□□□□ -1.81
LINC01040-201ENST00000425048 PIK3R1P27986 724 aa3.77□□□□□ -1.81
LINC01040-201ENST00000425048 LEPRP48357 1165 aaKnown RBP3.77□□□□□ -1.81
LINC01040-201ENST00000425048 PPP2R2BQ00005 443 aa3.77□□□□□ -1.81
LINC01040-201ENST00000425048 ZSCAN23Q3MJ62 389 aa3.77□□□□□ -1.81
LINC01040-201ENST00000425048 KLHL26Q53HC5 615 aa3.77□□□□□ -1.81
LINC01040-201ENST00000425048 KIRREL3Q8IZU9 778 aa3.77□□□□□ -1.81
LINC01040-201ENST00000425048 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.77□□□□□ -1.81
LINC01040-201ENST00000425048 TSPYL6Q8N831 410 aa3.77□□□□□ -1.81
LINC01040-201ENST00000425048 FRMD1Q8N878 549 aa3.77□□□□□ -1.81
LINC01040-201ENST00000425048 NUP37Q8NFH4 326 aa3.77□□□□□ -1.81
LINC01040-201ENST00000425048 MIPOL1Q8TD10 442 aa3.77□□□□□ -1.81
LINC01040-201ENST00000425048 FAM81BQ96LP2 452 aa3.77□□□□□ -1.81
LINC01040-201ENST00000425048 DACH2Q96NX9 599 aa3.77□□□□□ -1.81
LINC01040-201ENST00000425048 DDOQ99489 341 aa3.77□□□□□ -1.81
LINC01040-201ENST00000425048 OSGIN1Q9UJX0 560 aa3.77□□□□□ -1.81
LINC01040-201ENST00000425048 GRID1Q9ULK0 1009 aa3.77□□□□□ -1.81
LINC01040-201ENST00000425048 CELA1Q9UNI1 258 aa3.77□□□□□ -1.81
LINC01040-201ENST00000425048 IGKV6D-21A0A0A0MT36 114 aa3.76□□□□□ -1.81
LINC01040-201ENST00000425048 PHOX2AO14813 284 aa3.76□□□□□ -1.81
LINC01040-201ENST00000425048 HPRP00739 348 aa3.76□□□□□ -1.81
LINC01040-201ENST00000425048 BSGP35613 385 aa3.76□□□□□ -1.81
LINC01040-201ENST00000425048 PCGF3Q3KNV8 242 aa3.76□□□□□ -1.81
LINC01040-201ENST00000425048 MDH1BQ5I0G3 518 aa3.76□□□□□ -1.81
LINC01040-201ENST00000425048 RARS2Q5T160 578 aaKnown RBP3.76□□□□□ -1.81
LINC01040-201ENST00000425048 TMEM198Q66K66 360 aa3.76□□□□□ -1.81
LINC01040-201ENST00000425048 TBC1D16Q8TBP0 767 aa3.76□□□□□ -1.81
LINC01040-201ENST00000425048 RNF128Q8TEB7 428 aa3.76□□□□□ -1.81
LINC01040-201ENST00000425048 MOAP1Q96BY2 351 aa3.76□□□□□ -1.81
LINC01040-201ENST00000425048 WASH6PQ9NQA3 447 aa3.76□□□□□ -1.81
LINC01040-201ENST00000425048 KCNE2Q9Y6J6 123 aa3.76□□□□□ -1.81
LINC01040-201ENST00000425048 PRSS51A0A1B0GVH4 220 aa3.75□□□□□ -1.81
LINC01040-201ENST00000425048 A0A1W2PPH5 198 aa3.75□□□□□ -1.81
LINC01040-201ENST00000425048 ASB14A6NK59 587 aa3.75□□□□□ -1.81
LINC01040-201ENST00000425048 KRTAP10-1P60331 282 aa3.75□□□□□ -1.81
LINC01040-201ENST00000425048 SNRPEP62304 92 aaKnown RBP3.75□□□□□ -1.81
LINC01040-201ENST00000425048 EIF4A2Q14240 407 aaKnown RBP3.75□□□□□ -1.81
LINC01040-201ENST00000425048 MTHFSDQ2M296 383 aaKnown RBP3.75□□□□□ -1.81
LINC01040-201ENST00000425048 RNF212Q495C1 297 aa3.75□□□□□ -1.81
LINC01040-201ENST00000425048 C20orf194Q5TEA3 1177 aa3.75□□□□□ -1.81
LINC01040-201ENST00000425048 LYSMD4Q5XG99 296 aa3.75□□□□□ -1.81
LINC01040-201ENST00000425048 R3HCC1LQ7Z5L2 792 aaKnown RBP3.75□□□□□ -1.81
LINC01040-201ENST00000425048 ESX1Q8N693 406 aa3.75□□□□□ -1.81
LINC01040-201ENST00000425048 ETNPPLQ8TBG4 499 aa3.75□□□□□ -1.81
LINC01040-201ENST00000425048 SMAP2Q8WU79 429 aaPredicted RBP3.75□□□□□ -1.81
LINC01040-201ENST00000425048 ZUFSPQ96AP4 578 aa3.75□□□□□ -1.81
LINC01040-201ENST00000425048 PERPQ96FX8 193 aa3.75□□□□□ -1.81
LINC01040-201ENST00000425048 GAD1Q99259 594 aa3.75□□□□□ -1.81
LINC01040-201ENST00000425048 AGXT2Q9BYV1 514 aa3.75□□□□□ -1.81
LINC01040-201ENST00000425048 RTN4RQ9BZR6 473 aa3.75□□□□□ -1.81
LINC01040-201ENST00000425048 VN1R1Q9GZP7 353 aa3.75□□□□□ -1.81
LINC01040-201ENST00000425048 TEX10Q9NXF1 929 aaPredicted RBP3.75□□□□□ -1.81
LINC01040-201ENST00000425048 MTMR6Q9Y217 621 aa3.75□□□□□ -1.81
LINC01040-201ENST00000425048 SRRM5B3KS81 715 aa3.74□□□□□ -1.81
LINC01040-201ENST00000425048 NMBRP28336 390 aa3.74□□□□□ -1.81
LINC01040-201ENST00000425048 MAPK9P45984 424 aa3.74□□□□□ -1.81
LINC01040-201ENST00000425048 B3GALT5-AS1P59052 145 aa3.74□□□□□ -1.81
LINC01040-201ENST00000425048 CX3CL1P78423 397 aa3.74□□□□□ -1.81
LINC01040-201ENST00000425048 SLC34A3Q8N130 599 aa3.74□□□□□ -1.81
LINC01040-201ENST00000425048 SLC45A3Q96JT2 553 aa3.74□□□□□ -1.81
LINC01040-201ENST00000425048 PKNOX2Q96KN3 472 aa3.74□□□□□ -1.81
LINC01040-201ENST00000425048 AGAP4Q96P64 663 aa3.74□□□□□ -1.81
LINC01040-201ENST00000425048 FNBP1Q96RU3 617 aa3.74□□□□□ -1.81
LINC01040-201ENST00000425048 NCAPGQ9BPX3 1015 aa3.74□□□□□ -1.81
LINC01040-201ENST00000425048 ARRDC1-AS1Q9H2J1 176 aa3.74□□□□□ -1.81
LINC01040-201ENST00000425048 EHD2Q9NZN4 543 aa3.74□□□□□ -1.81
LINC01040-201ENST00000425048 ACOD1A6NK06 481 aa3.73□□□□□ -1.81
LINC01040-201ENST00000425048 EIF2S1P05198 315 aaKnown RBP3.73□□□□□ -1.81
LINC01040-201ENST00000425048 PYGLP06737 847 aa3.73□□□□□ -1.81
LINC01040-201ENST00000425048 BIRC3Q13489 604 aa3.73□□□□□ -1.81
LINC01040-201ENST00000425048 GRTP1Q5TC63 336 aa3.73□□□□□ -1.81
LINC01040-201ENST00000425048 TICAM1Q8IUC6 712 aa3.73□□□□□ -1.81
LINC01040-201ENST00000425048 DIS3L2Q8IYB7 885 aaKnown RBP3.73□□□□□ -1.81
LINC01040-201ENST00000425048 Q8N7P7 452 aa3.73□□□□□ -1.81
LINC01040-201ENST00000425048 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.73□□□□□ -1.81
LINC01040-201ENST00000425048 VANGL1Q8TAA9 524 aaPredicted RBP3.73□□□□□ -1.81
LINC01040-201ENST00000425048 ARHGEF2Q92974 986 aaKnown RBP3.73□□□□□ -1.81
LINC01040-201ENST00000425048 RRP36Q96EU6 259 aaKnown RBP3.73□□□□□ -1.81
LINC01040-201ENST00000425048 ABCB10Q9NRK6 738 aa3.73□□□□□ -1.81
LINC01040-201ENST00000425048 SETD4Q9NVD3 440 aa3.73□□□□□ -1.81
LINC01040-201ENST00000425048 LYVE1Q9Y5Y7 322 aa3.73□□□□□ -1.81
LINC01040-201ENST00000425048 IFRD1O00458 451 aaPredicted RBP3.72□□□□□ -1.81
LINC01040-201ENST00000425048 GAPDHSO14556 408 aaPredicted RBP3.72□□□□□ -1.81
LINC01040-201ENST00000425048 TO15178 435 aa3.72□□□□□ -1.81
LINC01040-201ENST00000425048 ZFP36L1Q07352 338 aaKnown RBP3.72□□□□□ -1.81
LINC01040-201ENST00000425048 KCNC3Q14003 757 aa3.72□□□□□ -1.81
LINC01040-201ENST00000425048 INTS11Q5TA45 600 aaKnown RBP3.72□□□□□ -1.81
LINC01040-201ENST00000425048 FAM166AQ6J272 317 aa3.72□□□□□ -1.81
LINC01040-201ENST00000425048 SLC47A2Q86VL8 602 aa3.72□□□□□ -1.81
LINC01040-201ENST00000425048 KCNMB4Q86W47 210 aa3.72□□□□□ -1.81
LINC01040-201ENST00000425048 ZNF354CQ86Y25 554 aa3.72□□□□□ -1.81
LINC01040-201ENST00000425048 ARID3BQ8IVW6 561 aaPredicted RBP3.72□□□□□ -1.81
LINC01040-201ENST00000425048 MAPK15Q8TD08 544 aa3.72□□□□□ -1.81
LINC01040-201ENST00000425048 LRRC15Q8TF66 581 aa3.72□□□□□ -1.81
LINC01040-201ENST00000425048 C1orf74Q96LT6 269 aa3.72□□□□□ -1.81
LINC01040-201ENST00000425048 OR2A14Q96R47 310 aa3.72□□□□□ -1.81
LINC01040-201ENST00000425048 CPVLQ9H3G5 476 aa3.72□□□□□ -1.81
LINC01040-201ENST00000425048 MED20Q9H944 212 aa3.72□□□□□ -1.81
LINC01040-201ENST00000425048 GNB4Q9HAV0 340 aa3.72□□□□□ -1.81
LINC01040-201ENST00000425048 PREBQ9HCU5 417 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms