RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 ICKQ9UPZ9 632 aa17.91■□□□□ 0.46
NUP50-207ENST00000424634 HEMK1Q9Y5R4 338 aaPredicted RBP17.91■□□□□ 0.46
NUP50-207ENST00000424634 ASH1LQ9NR48 2969 aaKnown RBP17.91■□□□□ 0.46
NUP50-207ENST00000424634 SNRNP200O75643 2136 aaKnown RBP17.9■□□□□ 0.46
NUP50-207ENST00000424634 MATN2O00339 956 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 CREG1O75629 220 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 SCRG1O75711 98 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 FGGP02679 453 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 FTH1P02794 183 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 PVRP15151 417 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 KCNJ1P48048 391 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 GPS2Q13227 327 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 LAMB3Q13751 1172 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 ZNF789Q5FWF6 425 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 TMTC4Q5T4D3 741 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 LYPLAL1Q5VWZ2 237 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 AFTPHQ6ULP2 937 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 LDB1Q86U70 411 aaPredicted RBP17.9■□□□□ 0.46
NUP50-207ENST00000424634 OR6P1Q8NGX9 317 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 SGSM3Q96HU1 749 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 TRAPPC9Q96Q05 1148 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 KLHL25Q9H0H3 589 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 PCDHB3Q9Y5E6 796 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 KCNMB2Q9Y691 235 aa17.9■□□□□ 0.46
NUP50-207ENST00000424634 PIPSLA2A3N6 862 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 C21orf140B9A014 251 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 QSOX1O00391 747 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 OR56A5P0C7T3 313 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 CRADDP78560 199 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 ABRQ12979 859 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 LCN10Q6JVE6 187 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 ZNF517Q6ZMY9 492 aaPredicted RBP17.89■□□□□ 0.45
NUP50-207ENST00000424634 UNC5AQ6ZN44 842 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 NLRP9Q7RTR0 991 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 TMEM126BQ8IUX1 230 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 OR8K5Q8NH50 307 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 OR1L3Q8NH93 324 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 LKAAEAR1Q8TD35 194 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.89■□□□□ 0.45
NUP50-207ENST00000424634 ABHD17AQ96GS6 310 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 TRIM4Q9C037 500 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 ACTL8Q9H568 366 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 ZNF71Q9NQZ8 489 aaPredicted RBP17.89■□□□□ 0.45
NUP50-207ENST00000424634 LATS2Q9NRM7 1088 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 ACTR10Q9NZ32 417 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 MARCH4Q9P2E8 410 aaPredicted RBP17.89■□□□□ 0.45
NUP50-207ENST00000424634 ASF1AQ9Y294 204 aa17.89■□□□□ 0.45
NUP50-207ENST00000424634 CDC14CA4D256 554 aa17.88■□□□□ 0.45
NUP50-207ENST00000424634 IQCF5A8MTL0 148 aa17.88■□□□□ 0.45
NUP50-207ENST00000424634 C2orf74A8MZ97 194 aa17.88■□□□□ 0.45
NUP50-207ENST00000424634 CPNE3O75131 537 aaKnown RBP17.88■□□□□ 0.45
NUP50-207ENST00000424634 RECKO95980 971 aa17.88■□□□□ 0.45
NUP50-207ENST00000424634 CCR7P32248 378 aa17.88■□□□□ 0.45
NUP50-207ENST00000424634 CXCR5P32302 372 aa17.88■□□□□ 0.45
NUP50-207ENST00000424634 CSE1LP55060 971 aaKnown RBP17.88■□□□□ 0.45
NUP50-207ENST00000424634 SESN2P58004 480 aaPredicted RBP17.88■□□□□ 0.45
NUP50-207ENST00000424634 RPS18P62269 152 aaKnown RBP17.88■□□□□ 0.45
NUP50-207ENST00000424634 FASTKD1Q53R41 847 aaKnown RBP17.88■□□□□ 0.45
NUP50-207ENST00000424634 PCID2Q5JVF3 399 aa17.88■□□□□ 0.45
NUP50-207ENST00000424634 PLEKHS1Q5SXH7 462 aa17.88■□□□□ 0.45
NUP50-207ENST00000424634 ATG14Q6ZNE5 492 aa17.88■□□□□ 0.45
NUP50-207ENST00000424634 VRK3Q8IV63 474 aa17.88■□□□□ 0.45
NUP50-207ENST00000424634 TBC1D21Q8IYX1 336 aa17.88■□□□□ 0.45
NUP50-207ENST00000424634 FLVCR1-AS1Q8TAF5 88 aa17.88■□□□□ 0.45
NUP50-207ENST00000424634 PEX13Q92968 403 aa17.88■□□□□ 0.45
NUP50-207ENST00000424634 TWSG1Q9GZX9 223 aa17.88■□□□□ 0.45
NUP50-207ENST00000424634 EIF2B3Q9NR50 452 aaKnown RBP17.88■□□□□ 0.45
NUP50-207ENST00000424634 SPHK1Q9NYA1 384 aa17.88■□□□□ 0.45
NUP50-207ENST00000424634 CDYLQ9Y232 598 aa17.88■□□□□ 0.45
NUP50-207ENST00000424634 ZKSCAN5Q9Y2L8 839 aa17.88■□□□□ 0.45
NUP50-207ENST00000424634 MED13Q9UHV7 2174 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 SPENQ96T58 3664 aaKnown RBP17.87■□□□□ 0.45
NUP50-207ENST00000424634 TMEM150CB9EJG8 249 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 CEP104O60308 925 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 MSL3P1P0C860 447 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 PTPN4P29074 926 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 PRAMEP78395 509 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 SPESP1Q6UW49 350 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 CDHR3Q6ZTQ4 885 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 TRIM73Q86UV7 250 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 PRELID2Q8N945 189 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 PPHLN1Q8NEY8 458 aaKnown RBP17.87■□□□□ 0.45
NUP50-207ENST00000424634 TRIM58Q8NG06 486 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 OR5K2Q8NHB8 316 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 MR1Q95460 341 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 OR2A14Q96R47 310 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 TTC1Q99614 292 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 AP1M1Q9BXS5 423 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 GPR87Q9BY21 358 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 CHST8Q9H2A9 424 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 FAM60AQ9NP50 221 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 TREX1Q9NSU2 369 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 PLAGL1Q9UM63 463 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 POLHQ9Y253 713 aa17.87■□□□□ 0.45
NUP50-207ENST00000424634 TDRKHQ9Y2W6 561 aaKnown RBP17.87■□□□□ 0.45
NUP50-207ENST00000424634 UBR5O95071 2799 aaPredicted RBP17.87■□□□□ 0.45
NUP50-207ENST00000424634 TCRBV7S3A2A0A539 114 aa17.86■□□□□ 0.45
NUP50-207ENST00000424634 K7EM74 188 aa17.86■□□□□ 0.45
NUP50-207ENST00000424634 HCRTR1O43613 425 aa17.86■□□□□ 0.45
NUP50-207ENST00000424634 GPC4O75487 556 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms