RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 MAGED1Q9Y5V3 778 aaPredicted RBP14.94□□□□□ -0.02
C9orf3-204ENST00000424143 SAGE2PA6NJ88 616 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 M0R3G1 203 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 PGRP06401 933 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 ZDHHC11BP0C7U3 371 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 BMP1P13497 986 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 HOXB9P17482 250 aaPredicted RBP14.93□□□□□ -0.02
C9orf3-204ENST00000424143 GNPDA1P46926 289 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 HTR6P50406 440 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 DGKQP52824 942 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 NKX3-2P78367 333 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 ABHD18Q0P651 414 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 PLEKHG6Q3KR16 790 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 RFTN2Q52LD8 501 aaPredicted RBP14.93□□□□□ -0.02
C9orf3-204ENST00000424143 CCDC92Q53HC0 331 aaPredicted RBP14.93□□□□□ -0.02
C9orf3-204ENST00000424143 SBSNQ6UWP8 590 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 PLEKHG7Q6ZR37 379 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 MILR1Q7Z6M3 343 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 SIDT2Q8NBJ9 832 aaKnown RBP14.93□□□□□ -0.02
C9orf3-204ENST00000424143 OR10A6Q8NH74 314 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 FBXO30Q8TB52 745 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 PPP1R13LQ8WUF5 828 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 TRIB2Q92519 343 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 SPATA17Q96L03 361 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 SIGLEC11Q96RL6 698 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 CDK5RAP1Q96SZ6 601 aaKnown RBP14.93□□□□□ -0.02
C9orf3-204ENST00000424143 CPPED1Q9BRF8 314 aaPredicted RBP14.93□□□□□ -0.02
C9orf3-204ENST00000424143 THUMPD3Q9BV44 507 aaKnown RBP14.93□□□□□ -0.02
C9orf3-204ENST00000424143 ADGRE3Q9BY15 652 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 DPY30Q9C005 99 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 ATP13A3Q9H7F0 1226 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 TM9SF3Q9HD45 589 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 ANKMY1Q9P2S6 941 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 UBA2Q9UBT2 640 aaPredicted RBP14.93□□□□□ -0.02
C9orf3-204ENST00000424143 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.93□□□□□ -0.02
C9orf3-204ENST00000424143 OARD1Q9Y530 152 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 POLR3HQ9Y535 204 aaPredicted RBP14.93□□□□□ -0.02
C9orf3-204ENST00000424143 V9GYQ6 96 aa14.93□□□□□ -0.02
C9orf3-204ENST00000424143 TAF4O00268 1085 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 SYN3O14994 580 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 NIPSNAP2O75323 286 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 ANGPTL1O95841 491 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 POMCP01189 267 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 F11P03951 625 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 PRSS56P0CW18 603 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 PCNAP12004 261 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 EFNA1P20827 205 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-204ENST00000424143 PRPH2P23942 346 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 MC4RP32245 332 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 HOXD12P35452 270 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 MAGEA10P43363 369 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-204ENST00000424143 PIK3CGP48736 1102 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 ST13P50502 369 aaKnown RBP14.92□□□□□ -0.02
C9orf3-204ENST00000424143 PPP5CP53041 499 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 CDH4P55283 916 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 CACNG1Q06432 222 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 ABRAXAS2Q15018 415 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 SLC39A12Q504Y0 691 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 KDM4DQ6B0I6 523 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 SPESP1Q6UW49 350 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 LRRC8DQ7L1W4 858 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 ZNF598Q86UK7 904 aaKnown RBP14.92□□□□□ -0.02
C9orf3-204ENST00000424143 TSPYL5Q86VY4 417 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-204ENST00000424143 P2RY8Q86VZ1 359 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 PIANPQ8IYJ0 282 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 FAM86B1Q8N7N1 296 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 SGCDQ92629 289 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 FCGR1BQ92637 280 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 HHIPQ96QV1 700 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 APOL4Q9BPW4 351 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 CINPQ9BW66 212 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-204ENST00000424143 PIF1Q9H611 641 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 RDH14Q9HBH5 336 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 SLC25A37Q9NYZ2 338 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 KLHL42Q9P2K6 505 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 RGS17Q9UGC6 210 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-204ENST00000424143 SAMD4AQ9UPU9 718 aaKnown RBP14.92□□□□□ -0.02
C9orf3-204ENST00000424143 INVSQ9Y283 1065 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 ASB1Q9Y576 335 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 PCDHGA10Q9Y5H3 936 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 ILVBLA1L0T0 632 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 SERTM1A2A2V5 107 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 F5H5T6 163 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 PRMT5O14744 637 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-204ENST00000424143 FFAR2O15552 330 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 HS6ST1O60243 411 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 E2F6O75461 281 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 EBLN1P0CF75 366 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 PRPS2P11908 318 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 SLC2A4P14672 509 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 AGXTP21549 392 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 CD6P30203 668 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 EIF2B2P49770 351 aaKnown RBP14.92□□□□□ -0.02
C9orf3-204ENST00000424143 CLDN8P56748 225 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 BEX3Q00994 111 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 ABRQ12979 859 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 NPTX1Q15818 432 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 ADPRMQ3LIE5 342 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 MLIPQ5VWP3 458 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 SPRYD7Q5W111 196 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms