RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 LAG3P18627 525 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 RECQLP46063 649 aaPredicted RBP11.67□□□□□ -0.54
PTPRN-204ENST00000423636 RGS4P49798 205 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 NEK5Q6P3R8 708 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 CRTC3Q6UUV7 619 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 ANGPTL8Q6UXH0 198 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 OR2A12Q8NGT7 310 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 RHBDF1Q96CC6 855 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 APIPQ96GX9 242 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 DPH2Q9BQC3 489 aaPredicted RBP11.67□□□□□ -0.54
PTPRN-204ENST00000423636 TMEM121BQ9BXQ6 578 aaPredicted RBP11.67□□□□□ -0.54
PTPRN-204ENST00000423636 TDP1Q9NUW8 608 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 CPSF4O95639 269 aaKnown RBP11.67□□□□□ -0.54
PTPRN-204ENST00000423636 EFEMP2O95967 443 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 TFAP2AP05549 437 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 CDKN2CP42773 168 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 ERVK-8P63133 956 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 PRKG2Q13237 762 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 LAMB3Q13751 1172 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 C16orf72Q14CZ0 275 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 ACOX1Q15067 660 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 CDKN3Q16667 212 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 AARS2Q5JTZ9 985 aaKnown RBP11.67□□□□□ -0.54
PTPRN-204ENST00000423636 DTWD1Q8N5C7 304 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 VOPP1Q96AW1 172 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 BIRC7Q96CA5 298 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 SMURF2Q9HAU4 748 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 PCDH12Q9NPG4 1184 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 SMOXQ9NWM0 555 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 SUCOQ9UBS9 1254 aaKnown RBP11.67□□□□□ -0.54
PTPRN-204ENST00000423636 LIMD1Q9UGP4 676 aa11.67□□□□□ -0.54
PTPRN-204ENST00000423636 COL4A4P53420 1690 aaPredicted RBP11.67□□□□□ -0.54
PTPRN-204ENST00000423636 STK16O75716 305 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 HSPA8P11142 646 aaKnown RBP11.66□□□□□ -0.54
PTPRN-204ENST00000423636 EPB42P16452 691 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 CEBPBP17676 345 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 HRH2P25021 359 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 AP1S1P61966 158 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 TRIML2Q8N7C3 387 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 FATE1Q969F0 183 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 TRMT2BQ96GJ1 504 aaKnown RBP11.66□□□□□ -0.54
PTPRN-204ENST00000423636 SAMD11Q96NU1 681 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 LRRC3Q9BY71 257 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 DPY30Q9C005 99 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 ZBP1Q9H171 429 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 GPRC5BQ9NZH0 403 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 FADS2P1A8MWK0 482 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 HTRA2O43464 458 aaPredicted RBP11.66□□□□□ -0.54
PTPRN-204ENST00000423636 TSPAN6O43657 245 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 TCF3P15923 654 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 DGKAP23743 735 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 PSMA4P25789 261 aaKnown RBP11.66□□□□□ -0.54
PTPRN-204ENST00000423636 PTGER1P34995 402 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 POLR2IP36954 125 aaKnown RBP11.66□□□□□ -0.54
PTPRN-204ENST00000423636 DGKEP52429 567 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 PHC1P78364 1004 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 SLC14A1Q13336 389 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 ADAMTSL2Q86TH1 951 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 TMEM199Q8N511 208 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 OR52E6Q96RD3 313 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 DCUN1D5Q9BTE7 237 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 TRIM4Q9C037 500 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 SLC52A3Q9NQ40 469 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 GID8Q9NWU2 228 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 PNMA8BQ9ULN7 279 aaPredicted RBP11.66□□□□□ -0.54
PTPRN-204ENST00000423636 INVSQ9Y283 1065 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 CASQ2O14958 399 aaPredicted RBP11.66□□□□□ -0.54
PTPRN-204ENST00000423636 GSTA4O15217 222 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 FAM58BPP0C7Q3 252 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 VARSP26640 1264 aaKnown RBP11.66□□□□□ -0.54
PTPRN-204ENST00000423636 PCSK6P29122 969 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 SLC26A3P40879 764 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 RCAN2Q14206 197 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 OR7A2PQ8NGA2 310 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 FIBINQ8TAL6 211 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 NXPE3Q969Y0 559 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 NR1H4Q96RI1 486 aaPredicted RBP11.66□□□□□ -0.54
PTPRN-204ENST00000423636 CCT7Q99832 543 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 GPATCH1Q9BRR8 931 aaKnown RBP11.66□□□□□ -0.54
PTPRN-204ENST00000423636 CHID1Q9BWS9 393 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 ACPTQ9BZG2 426 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 CD244Q9BZW8 370 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 ELOVL6Q9H5J4 265 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 SPATS2LQ9NUQ6 558 aaKnown RBP11.66□□□□□ -0.54
PTPRN-204ENST00000423636 PCDHA9Q9Y5H5 950 aa11.66□□□□□ -0.54
PTPRN-204ENST00000423636 IFRD1O00458 451 aaPredicted RBP11.65□□□□□ -0.54
PTPRN-204ENST00000423636 ADH1AP07327 375 aa11.65□□□□□ -0.54
PTPRN-204ENST00000423636 CTSAP10619 480 aa11.65□□□□□ -0.54
PTPRN-204ENST00000423636 CYP4B1P13584 511 aa11.65□□□□□ -0.54
PTPRN-204ENST00000423636 EPORP19235 508 aa11.65□□□□□ -0.54
PTPRN-204ENST00000423636 SLC7A1P30825 629 aa11.65□□□□□ -0.54
PTPRN-204ENST00000423636 NAE1Q13564 534 aa11.65□□□□□ -0.54
PTPRN-204ENST00000423636 STARD3Q14849 445 aa11.65□□□□□ -0.54
PTPRN-204ENST00000423636 NKG7Q16617 165 aa11.65□□□□□ -0.54
PTPRN-204ENST00000423636 UAP1L1Q3KQV9 507 aa11.65□□□□□ -0.54
PTPRN-204ENST00000423636 CARD16Q5EG05 197 aa11.65□□□□□ -0.54
PTPRN-204ENST00000423636 OR4F3Q6IEY1 312 aa11.65□□□□□ -0.54
PTPRN-204ENST00000423636 USP45Q70EL2 814 aa11.65□□□□□ -0.54
PTPRN-204ENST00000423636 ADGRG6Q86SQ4 1221 aa11.65□□□□□ -0.54
PTPRN-204ENST00000423636 STK32CQ86UX6 486 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms