RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 OTUD4Q01804 1114 aaKnown RBP16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 TLR1Q15399 786 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 NKAIN1Q4KMZ8 207 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 ALKBH5Q6P6C2 394 aaKnown RBP16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 DAAM2Q86T65 1068 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 AMIGO1Q86WK6 493 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 TMEM151BQ8IW70 566 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 OR52E1Q8NGJ3 308 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 HM13Q8TCT9 377 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 NAT14Q8WUY8 206 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 SYN2Q92777 582 aaPredicted RBP16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 N4BP2L2Q92802 583 aaPredicted RBP16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.16■□□□□ 0.181e-6■■■■■ 44.9
CHCHD3-202ENST00000423635 MRGPRX2Q96LB1 330 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 NRTNQ99748 197 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 SLC6A20Q9NP91 592 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 LMBRD1Q9NUN5 540 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 ACTR10Q9NZ32 417 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 LCMT1Q9UIC8 334 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 DOCK10Q96BY6 2186 aa16.16■□□□□ 0.18
CHCHD3-202ENST00000423635 DCHS2Q6V1P9 2916 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 MYO7BQ6PIF6 2116 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 AGAP14A8MT82 685 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 APOL1O14791 398 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 HCRTR1O43613 425 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 ZFXP17010 805 aaPredicted RBP16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 MMP11P24347 488 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 CHRNA4P43681 627 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 CD151P48509 253 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 SLC1A5Q15758 541 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 FILIP1LQ4L180 1135 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 ZNF324BQ6AW86 544 aaPredicted RBP16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 TLDC1Q6P9B6 456 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 SARM1Q6SZW1 724 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 SPESP1Q6UW49 350 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 NPNTQ6UXI9 565 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 SLC25A41Q8N5S1 370 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 C19orf47Q8N9M1 422 aaKnown RBP16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 BLOC1S5Q8TDH9 187 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 ITLN2Q8WWU7 325 aaPredicted RBP16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 RBM41Q96IZ5 413 aaKnown RBP16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 MAK16Q9BXY0 300 aaKnown RBP16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 OR52A5Q9H2C5 316 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 MVB12BQ9H7P6 319 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 SLC22A11Q9NSA0 550 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 UVRAGQ9P2Y5 699 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 DHCR7Q9UBM7 475 aaKnown RBP16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 FAM8A1Q9UBU6 413 aa16.15■□□□□ 0.18
CHCHD3-202ENST00000423635 TACC2O95359 2948 aa16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 A0A1B0GTH6 734 aa16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 STX7O15400 261 aaKnown RBP16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 JRKO75564 520 aa16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 PRAMEF1O95521 474 aa16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 ONECUT2O95948 504 aa16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 PRLHRP49683 370 aa16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 PTPRCAPQ14761 206 aa16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 ZIC1Q15915 447 aa16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 ZNF658BQ4V348 819 aaPredicted RBP16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 FAM180AQ6UWF9 173 aa16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 BCORP1Q8N888 145 aa16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 PHC3Q8NDX5 983 aa16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 NAP1L5Q96NT1 182 aaPredicted RBP16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 TRIM56Q9BRZ2 755 aaKnown RBP16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 ASB8Q9H765 288 aa16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 CHST11Q9NPF2 352 aa16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 TXLNGQ9NUQ3 528 aa16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 OLAHQ9NV23 265 aa16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 CTTNBP2NLQ9P2B4 639 aa16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 FBXL4Q9UKA2 621 aa16.14■□□□□ 0.17
CHCHD3-202ENST00000423635 CCDC78A2IDD5 438 aa16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 LRRD1A4D1F6 860 aa16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 IFRD1O00458 451 aaPredicted RBP16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 SOCS6O14544 535 aa16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 ZSCAN9O15535 394 aaPredicted RBP16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 SRP72O76094 671 aaKnown RBP16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 SERPING1P05155 500 aa16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 CTSBP07858 339 aa16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 TNNT3P45378 269 aaPredicted RBP16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 WASHC5Q12768 1159 aa16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 SLC9A5Q14940 896 aa16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 PRKD1Q15139 912 aaPredicted RBP16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 ZNF630Q2M218 657 aaPredicted RBP16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 BNC2Q6ZN30 1099 aaPredicted RBP16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 PARP9Q8IXQ6 854 aa16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 ZNF655Q8N720 491 aaPredicted RBP16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 CNDP1Q96KN2 507 aa16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 OR2A14Q96R47 310 aa16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 FCRL5Q96RD9 977 aa16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 LMF1Q96S06 567 aa16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 LHPPQ9H008 270 aa16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 XKR8Q9H6D3 395 aa16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 EPS8L2Q9H6S3 715 aa16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 COG4Q9H9E3 785 aa16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 NENFQ9UMX5 172 aa16.13■□□□□ 0.17
CHCHD3-202ENST00000423635 PKDREJQ9NTG1 2253 aa16.12■□□□□ 0.17
CHCHD3-202ENST00000423635 PCDH17O14917 1159 aa16.12■□□□□ 0.17
CHCHD3-202ENST00000423635 ALBP02768 609 aa16.12■□□□□ 0.17
CHCHD3-202ENST00000423635 NFKB1P19838 968 aa16.12■□□□□ 0.17
CHCHD3-202ENST00000423635 GCGRP47871 477 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms