RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 PRKAA1Q13131 559 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 CAMK2BQ13554 666 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 CUL1Q13616 776 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 ACSBG2Q5FVE4 666 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 RBM20Q5T481 1227 aaKnown RBP15.33■□□□□ 0.04
BRAT1-202ENST00000421712 RAB11FIP2Q7L804 512 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 GALNT7Q86SF2 657 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 SLITRK4Q8IW52 837 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 FBXO39Q8N4B4 442 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 OR52E1Q8NGJ3 308 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 OR5K2Q8NHB8 316 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 WDR36Q8NI36 951 aaKnown RBP15.33■□□□□ 0.04
BRAT1-202ENST00000421712 NXPE2Q96DL1 559 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 ZDHHC12Q96GR4 267 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 NRSN2Q9GZP1 204 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 XKR8Q9H6D3 395 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 LRRC4CQ9HCJ2 640 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 LATS2Q9NRM7 1088 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 TAS2R13Q9NYV9 303 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 OGFRQ9NZT2 677 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 DHRS7Q9Y394 339 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 NCOR2Q9Y618 2525 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 GSAPA4D1B5 854 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 SPAG6O75602 509 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 JMJD7P0C870 316 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 POLR2CP19387 275 aaPredicted RBP15.32■□□□□ 0.04
BRAT1-202ENST00000421712 MCM3P25205 808 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 STX2P32856 288 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 CSTF2P33240 577 aaKnown RBP eCLIP15.32■□□□□ 0.04
BRAT1-202ENST00000421712 SKIV2L2P42285 1042 aaKnown RBP15.32■□□□□ 0.04
BRAT1-202ENST00000421712 CAPZBP47756 277 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 GFERP55789 205 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 CYP4F3Q08477 520 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 TRA2AQ13595 282 aaKnown RBP eCLIP15.32■□□□□ 0.04
BRAT1-202ENST00000421712 KLHL38Q2WGJ6 581 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 HECTD2Q5U5R9 776 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 UNC5DQ6UXZ4 953 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 FAM92BQ6ZTR7 304 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 SLC26A11Q86WA9 606 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 AMIGO1Q86WK6 493 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 PPM1NQ8N819 430 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 FBF1Q8TES7 1133 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 LIN37Q96GY3 246 aaPredicted RBP15.32■□□□□ 0.04
BRAT1-202ENST00000421712 ELMO2Q96JJ3 720 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 SLC30A3Q99726 388 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 TFB2MQ9H5Q4 396 aaKnown RBP15.32■□□□□ 0.04
BRAT1-202ENST00000421712 POLR1BQ9H9Y6 1135 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 KLHL42Q9P2K6 505 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 CORO1CQ9ULV4 474 aaPredicted RBP15.32■□□□□ 0.04
BRAT1-202ENST00000421712 PLAGL1Q9UM63 463 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 NFU1Q9UMS0 254 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 RUVBL2Q9Y230 463 aaKnown RBP15.32■□□□□ 0.04
BRAT1-202ENST00000421712 VWA7Q9Y334 891 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 LOXL2Q9Y4K0 774 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 PSAT1Q9Y617 370 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 KIF26BQ2KJY2 2108 aa15.32■□□□□ 0.04
BRAT1-202ENST00000421712 OR5K3A6NET4 321 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 CXorf49A8MYA2 514 aaPredicted RBP15.31■□□□□ 0.04
BRAT1-202ENST00000421712 C1QTNF9BB2RNN3 333 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 PLD2O14939 933 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 C1QTNF9P0C862 333 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 THRAP10827 490 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 RBMS1P29558 406 aaKnown RBP15.31■□□□□ 0.04
BRAT1-202ENST00000421712 PHBP35232 272 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 SEPHS1P49903 392 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 CDKN2DP55273 166 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 EIF3IQ13347 325 aaKnown RBP15.31■□□□□ 0.04
BRAT1-202ENST00000421712 PDAP1Q13442 181 aaKnown RBP15.31■□□□□ 0.04
BRAT1-202ENST00000421712 KYNUQ16719 465 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 CACHD1Q5VU97 1274 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 FAM45BPQ6NSW5 357 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 UNQ6494/PRO21346Q6UXR6 183 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 CYS1Q717R9 158 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 FAM129CQ86XR2 697 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 DCUN1D3Q8IWE4 304 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 CPNE9Q8IYJ1 553 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 AGBL5Q8NDL9 886 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 FAM45AQ8TCE6 357 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 MAGEC3Q8TD91 643 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 GATA6Q92908 595 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 CCDC86Q9H6F5 360 aaKnown RBP15.31■□□□□ 0.04
BRAT1-202ENST00000421712 SMYD2Q9NRG4 433 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 PISDQ9UG56 409 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 CIDEBQ9UHD4 219 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 SLC39A10Q9ULF5 831 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 NFS1Q9Y697 457 aa15.31■□□□□ 0.04
BRAT1-202ENST00000421712 FAM159BA6NKW6 160 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 HGSO14964 777 aaPredicted RBP15.3■□□□□ 0.04
BRAT1-202ENST00000421712 TNFSF15O95150 251 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 CBSLP0DN79 551 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 HGFP14210 728 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 ATP5DP30049 168 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 SHMT2P34897 504 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 CBSP35520 551 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 BDKRB1P46663 353 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 LSSP48449 732 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 RGS4P49798 205 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 SLC12A2P55011 1212 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 C16orf72Q14CZ0 275 aa15.3■□□□□ 0.04
BRAT1-202ENST00000421712 RTP5Q14D33 572 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms