RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 PTPN9P43378 593 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 CASP9P55211 416 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 ERVK-8P63133 956 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 BTN3A2P78410 334 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 SMAD3P84022 425 aaKnown RBP12.15□□□□□ -0.46
CLCN4-203ENST00000421085 PPP1R8Q12972 351 aaKnown RBP12.15□□□□□ -0.46
CLCN4-203ENST00000421085 EFR3AQ14156 821 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 OR4C6Q8NH72 309 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 OSER1Q9NX31 292 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 IGSF9Q9P2J2 1179 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 ZDHHC2Q9UIJ5 367 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 DERAQ9Y315 318 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 HSPB11Q9Y547 144 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 SNX10Q9Y5X0 201 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 ILVBLA1L0T0 632 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 PDCD5O14737 125 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 ERN1O75460 977 aaKnown RBP12.15□□□□□ -0.46
CLCN4-203ENST00000421085 HERVK_113P63132 956 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 MRPS6P82932 125 aaKnown RBP12.15□□□□□ -0.46
CLCN4-203ENST00000421085 MVKQ03426 396 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 LAPTM5Q13571 262 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 PCBP1Q15365 356 aaKnown RBP eCLIP12.15□□□□□ -0.46
CLCN4-203ENST00000421085 MEP1AQ16819 746 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 ZNF311Q5JNZ3 666 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 CERS6Q6ZMG9 384 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 HDAC2Q92769 488 aaKnown RBP12.15□□□□□ -0.46
CLCN4-203ENST00000421085 ERVK-6Q9BXR3 956 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 POLR2J3Q9H1A7 115 aaKnown RBP12.15□□□□□ -0.46
CLCN4-203ENST00000421085 FAM53CQ9NYF3 392 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 CXCL11O14625 94 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 ZNF182P17025 639 aaPredicted RBP12.15□□□□□ -0.46
CLCN4-203ENST00000421085 GLDCP23378 1020 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 ECHS1P30084 290 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 SPAM1P38567 509 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 CLCN4P51793 760 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 ZNF404Q494X3 552 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 CATSPERGQ6ZRH7 1159 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 GPALPP1Q8IXQ4 340 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 OR2L3Q8NG85 312 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 COMMD4Q9H0A8 199 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 TREM1Q9NP99 234 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 POLR3BQ9NW08 1133 aaPredicted RBP12.15□□□□□ -0.46
CLCN4-203ENST00000421085 PHF24Q9UPV7 400 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 ALG5Q9Y673 324 aa12.15□□□□□ -0.46
CLCN4-203ENST00000421085 FXYD6-FXYD2A0A087WZ82 144 aa12.15□□□□□ -0.47
CLCN4-203ENST00000421085 TMEM233B4DJY2 109 aa12.15□□□□□ -0.47
CLCN4-203ENST00000421085 ATG13O75143 517 aa12.15□□□□□ -0.47
CLCN4-203ENST00000421085 XYLBO75191 536 aa12.15□□□□□ -0.47
CLCN4-203ENST00000421085 INMTO95050 263 aa12.15□□□□□ -0.47
CLCN4-203ENST00000421085 UNGP13051 313 aaPredicted RBP12.15□□□□□ -0.47
CLCN4-203ENST00000421085 IMPDH1P20839 514 aa12.15□□□□□ -0.47
CLCN4-203ENST00000421085 CPN2P22792 545 aa12.15□□□□□ -0.47
CLCN4-203ENST00000421085 ZNF267Q14586 743 aaPredicted RBP12.15□□□□□ -0.47
CLCN4-203ENST00000421085 PRAMEF17Q5VTA0 474 aa12.15□□□□□ -0.47
CLCN4-203ENST00000421085 CCDC28AQ8IWP9 274 aa12.15□□□□□ -0.47
CLCN4-203ENST00000421085 CDK15Q96Q40 435 aa12.15□□□□□ -0.47
CLCN4-203ENST00000421085 IL4I1Q96RQ9 567 aa12.15□□□□□ -0.47
CLCN4-203ENST00000421085 FXYD6Q9H0Q3 95 aa12.15□□□□□ -0.47
CLCN4-203ENST00000421085 POLE4Q9NR33 117 aa12.15□□□□□ -0.47
CLCN4-203ENST00000421085 IMP3Q9NV31 184 aaKnown RBP12.15□□□□□ -0.47
CLCN4-203ENST00000421085 ZNF639Q9UID6 485 aa12.15□□□□□ -0.47
CLCN4-203ENST00000421085 GNALP38405 381 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 BRCC3P46736 316 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 MMP14P50281 582 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 USF2Q15853 346 aaPredicted RBP12.14□□□□□ -0.47
CLCN4-203ENST00000421085 HMBOX1Q6NT76 420 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 INO80EQ8NBZ0 244 aaPredicted RBP12.14□□□□□ -0.47
CLCN4-203ENST00000421085 CUEDC1Q9NWM3 386 aaPredicted RBP12.14□□□□□ -0.47
CLCN4-203ENST00000421085 FZD10Q9ULW2 581 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 NR2E3Q9Y5X4 410 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 C1QTNF3-AMACRE9PGA6 284 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 PQBP1O60828 265 aaKnown RBP12.14□□□□□ -0.47
CLCN4-203ENST00000421085 XKP51811 444 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 CLCC1Q96S66 551 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 DPAGT1Q9H3H5 408 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 DTLQ9NZJ0 730 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 MARK1Q9P0L2 795 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 PTBP2Q9UKA9 531 aaKnown RBP12.14□□□□□ -0.47
CLCN4-203ENST00000421085 ATRNO75882 1429 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 PSMD9O00233 223 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 LDOC1O95751 146 aaPredicted RBP12.14□□□□□ -0.47
CLCN4-203ENST00000421085 F7P08709 466 aaPredicted RBP12.14□□□□□ -0.47
CLCN4-203ENST00000421085 CD72P21854 359 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 STOMP27105 288 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 NUDT6P53370 316 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 STXBP1P61764 594 aaKnown RBP12.14□□□□□ -0.47
CLCN4-203ENST00000421085 BTBD16Q32M84 506 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 FBXO43Q4G163 708 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 SH3PXD2AQ5TCZ1 1133 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 ZDHHC20Q5W0Z9 365 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 KIAA1161Q6NSJ0 714 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 ZNF773Q6PK81 442 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 KLHL36Q8N4N3 616 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 ZMIZ2Q8NF64 920 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 FAM110BQ8TC76 370 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 TIFAQ96CG3 184 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 SLC30A2Q9BRI3 323 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 TMEM9Q9P0T7 183 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 BOLA2-SMG1P6H3BVE0 249 aa12.14□□□□□ -0.47
CLCN4-203ENST00000421085 ABCB7O75027 752 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms