RNA–Protein interactions for RNA: ENST00000420453.1

LINC00993-201, long intergenic non-protein coding RNA 993, humanhuman

BASIC

Gene LINC00993, Length 540 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-201ENST00000420453 VPS51Q9UID3 782 aa4.91□□□□□ -1.62
LINC00993-201ENST00000420453 INTS6Q9UL03 887 aaKnown RBP4.91□□□□□ -1.62
LINC00993-201ENST00000420453 CLEC4EQ9ULY5 219 aa4.91□□□□□ -1.62
LINC00993-201ENST00000420453 MED16Q9Y2X0 877 aa4.91□□□□□ -1.62
LINC00993-201ENST00000420453 UTP11Q9Y3A2 253 aaKnown RBP4.91□□□□□ -1.62
LINC00993-201ENST00000420453 SNX13Q9Y5W8 968 aa4.91□□□□□ -1.62
LINC00993-201ENST00000420453 MYO9BQ13459 2157 aa4.91□□□□□ -1.62
LINC00993-201ENST00000420453 KIF26AQ9ULI4 1882 aaPredicted RBP4.9□□□□□ -1.62
LINC00993-201ENST00000420453 HELZP42694 1942 aaKnown RBP4.9□□□□□ -1.62
LINC00993-201ENST00000420453 SPECC1L-ADORA2AF8WAN1 911 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 J3KR12 359 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 MYO1CO00159 1063 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 KCNK1O00180 336 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 TTI1O43156 1089 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 FRS3O43559 492 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 SNAP91O60641 907 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 NCR1O76036 304 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 NEBLO76041 1014 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 TMCC1O94876 653 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 SEC31AO94979 1220 aaKnown RBP4.9□□□□□ -1.63
LINC00993-201ENST00000420453 HEXIM1O94992 359 aaKnown RBP4.9□□□□□ -1.63
LINC00993-201ENST00000420453 KAT7O95251 611 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 CD160O95971 181 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 IFNB1P01574 187 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 KRT14P02533 472 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 POLR2EP19388 210 aaKnown RBP4.9□□□□□ -1.63
LINC00993-201ENST00000420453 SP100P23497 879 aaPredicted RBP4.9□□□□□ -1.63
LINC00993-201ENST00000420453 MCM3P25205 808 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 IVDP26440 423 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 TNFRSF8P28908 595 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 RPL22P35268 128 aaKnown RBP4.9□□□□□ -1.63
LINC00993-201ENST00000420453 NNMTP40261 264 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 TNFRSF4P43489 277 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 MMP13P45452 471 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 CSNK1DP48730 415 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 LMAN1P49257 510 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 ARF5P84085 180 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 ECT2LQ008S8 904 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 CAV1Q03135 178 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 NSUN2Q08J23 767 aaKnown RBP eCLIP4.9□□□□□ -1.63
LINC00993-201ENST00000420453 ZBTB17Q13105 803 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 SLC13A2Q13183 592 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 CUL1Q13616 776 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 ENPP2Q13822 863 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 ZNF235Q14590 738 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 BRD3Q15059 726 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 PPP1R7Q15435 360 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 GEN1Q17RS7 908 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 PARP6Q2NL67 630 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 FBXO43Q4G163 708 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 TMEM196Q5HYL7 178 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 ANKRD20A2Q5SQ80 823 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 ANKRD20A1Q5TYW2 823 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 ANKRD20A3Q5VUR7 823 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 TMEM215Q68D42 235 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 DUPD1Q68J44 220 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 WDR93Q6P2C0 686 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 PID1Q7Z2X4 250 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 PCGF5Q86SE9 256 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 HOOK3Q86VS8 718 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 ZNF354CQ86Y25 554 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 PDSS2Q86YH6 399 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 APCDD1Q8J025 514 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 ZNF567Q8N184 647 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 PCDH20Q8N6Y1 951 aaKnown RBP4.9□□□□□ -1.63
LINC00993-201ENST00000420453 OR56A3Q8NH54 315 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 UCMAQ8WVF2 138 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.9□□□□□ -1.63
LINC00993-201ENST00000420453 SCAMP4Q969E2 229 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 TADA1Q96BN2 335 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 LRRC45Q96CN5 670 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 ZNF419Q96HQ0 510 aaPredicted RBP4.9□□□□□ -1.63
LINC00993-201ENST00000420453 ASB2Q96Q27 587 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 FCRL5Q96RD9 977 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 PNKPQ96T60 521 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 P2RY13Q9BPV8 354 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 LRRC1Q9BTT6 524 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 CINPQ9BW66 212 aaPredicted RBP4.9□□□□□ -1.63
LINC00993-201ENST00000420453 FRMD8Q9BZ67 464 aaPredicted RBP4.9□□□□□ -1.63
LINC00993-201ENST00000420453 POLR1EQ9GZS1 481 aaKnown RBP4.9□□□□□ -1.63
LINC00993-201ENST00000420453 YY1AP1Q9H869 796 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 VPS45Q9NRW7 570 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 RBM22Q9NW64 420 aaKnown RBP eCLIP4.9□□□□□ -1.63
LINC00993-201ENST00000420453 ELOVL2Q9NXB9 296 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 ETAA1Q9NY74 926 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 KLHL8Q9P2G9 620 aaPredicted RBP4.9□□□□□ -1.63
LINC00993-201ENST00000420453 ASIC3Q9UHC3 531 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 TAGLN3Q9UI15 199 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 SLC25A13Q9UJS0 675 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 DUSP12Q9UNI6 340 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 SLC8A2Q9UPR5 921 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 SHOC2Q9UQ13 582 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 RRP15Q9Y3B9 282 aaKnown RBP4.9□□□□□ -1.63
LINC00993-201ENST00000420453 DOCK8Q8NF50 2099 aa4.9□□□□□ -1.63
LINC00993-201ENST00000420453 LAMA2P24043 3122 aaKnown RBP4.89□□□□□ -1.63
LINC00993-201ENST00000420453 CCDC151A5D8V7 595 aa4.89□□□□□ -1.63
LINC00993-201ENST00000420453 TBC1D3BA6NDS4 549 aa4.89□□□□□ -1.63
LINC00993-201ENST00000420453 POM121BA6NF01 834 aa4.89□□□□□ -1.63
LINC00993-201ENST00000420453 WASH3PC4AMC7 463 aa4.89□□□□□ -1.63
LINC00993-201ENST00000420453 PRRT4C9JH25 899 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms