RNA–Protein interactions for RNA: ENST00000417833.2

TGFBR3-203, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-203ENST00000417833 ESR1P03372 595 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 THRAP10827 490 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 AOAHP28039 575 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 ACADLP28330 430 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 PDHA2P29803 388 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 CCR7P32248 378 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 PHBP35232 272 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 ERVPABLB-1P60509 514 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 PDIA2Q13087 525 aaKnown RBP12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 THOC5Q13769 683 aaKnown RBP12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 SPANXN3Q5MJ09 141 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 PTRHD1Q6GMV3 140 aaKnown RBP12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 KLHL35Q6PF15 583 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 ARHGAP22Q7Z5H3 698 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 PLXDC1Q8IUK5 500 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 MDM1Q8TC05 714 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 NCSTNQ92542 709 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 LPGAT1Q92604 370 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 ZNF578Q96N58 590 aaPredicted RBP12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 SLC46A1Q96NT5 459 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 CMKLR1Q99788 373 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 ROPN1BQ9BZX4 212 aaPredicted RBP12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 EPB41L4BQ9H329 900 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 KIR3DX1Q9H7L2 352 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 MVB12BQ9H7P6 319 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 PPCSQ9HAB8 311 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 ROPN1Q9HAT0 212 aaPredicted RBP12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 LATS2Q9NRM7 1088 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 IMP3Q9NV31 184 aaKnown RBP12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 NINJ2Q9NZG7 142 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 SATB2Q9UPW6 733 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 CDYLQ9Y232 598 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 NFS1Q9Y697 457 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 TEX264Q9Y6I9 313 aa12.9□□□□□ -0.34
TGFBR3-203ENST00000417833 TENM4Q6N022 2769 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 A0A087WUV0 522 aaPredicted RBP12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 GOLGA8TH3BQL2 631 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 PLD2O14939 933 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 SLCO2B1O94956 709 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 MPOP05164 745 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 GSTA2P09210 222 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 MYZAPP0CAP1 466 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 AMD1P17707 334 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 GABREP78334 506 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 BOP1Q14137 746 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 FRG1Q14331 258 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 SLC29A2Q14542 456 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 CRYMQ14894 314 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 BBS9Q3SYG4 887 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 C3orf38Q5JPI3 329 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 CEP85LQ5SZL2 805 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 PHF19Q5T6S3 580 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 IGDCC3Q8IVU1 814 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 ZBED8Q8IZ13 594 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 SLC22A15Q8IZD6 547 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 FBXO39Q8N4B4 442 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 ACVR1CQ8NER5 493 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 GABPB2Q8TAK5 448 aaPredicted RBP12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 PYROXD1Q8WU10 500 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 TFGQ92734 400 aaPredicted RBP12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 CCDC74BQ96LY2 380 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 FAM167BQ9BTA0 163 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 STMN4Q9H169 189 aaPredicted RBP12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 ASCL3Q9NQ33 180 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 C20orf96Q9NUD7 363 aaPredicted RBP12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 AKAP7Q9P0M2 348 aaPredicted RBP12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 FAM8A1Q9UBU6 413 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 SLC24A2Q9UI40 661 aa12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 CFAP20Q9Y6A4 193 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-203ENST00000417833 UBA6A0AVT1 1052 aaPredicted RBP12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 IQCF5A8MTL0 148 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 CDRT15L2A8MXV6 281 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 BRINP1O60477 761 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 ACSL3O95573 720 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 APOA4P06727 396 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 ITGA2BP08514 1039 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 ANKRD34CP0C6C1 535 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 RBMS1P29558 406 aaKnown RBP12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 OAS2P29728 719 aaKnown RBP12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 ELK3P41970 407 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 CAPZBP47756 277 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 PREPP48147 710 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 ZNF844Q08AG5 666 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 KRT33BQ14525 404 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 C16orf72Q14CZ0 275 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 KYNUQ16719 465 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 TBC1D25Q3MII6 688 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 KRT71Q3SY84 523 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 SYTL3Q4VX76 610 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 CTSL3PQ5NE16 218 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 PLEKHS1Q5SXH7 462 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 AGBL2Q5U5Z8 902 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 STEAP4Q687X5 459 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 ZNF470Q6ECI4 717 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 GALNT7Q86SF2 657 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 CLEC14AQ86T13 490 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 CNTN4Q8IWV2 1026 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 TBC1D21Q8IYX1 336 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 OTUD6BQ8N6M0 293 aa12.88□□□□□ -0.35
TGFBR3-203ENST00000417833 C9orf72Q96LT7 481 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms