RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 TIMM29Q9BSF4 260 aa14.24□□□□□ -0.13
SGCE-202ENST00000415788 APOBEC3BQ9UH17 382 aaKnown RBP14.24□□□□□ -0.13
SGCE-202ENST00000415788 ZNHIT2Q9UHR6 403 aa14.24□□□□□ -0.13
SGCE-202ENST00000415788 CRYL1Q9Y2S2 319 aa14.24□□□□□ -0.13
SGCE-202ENST00000415788 GON4LQ3T8J9 2241 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 CXorf49A8MYA2 514 aaPredicted RBP14.23□□□□□ -0.13
SGCE-202ENST00000415788 AHSGP02765 367 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 FUCA1P04066 466 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 INHBAP08476 426 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 ENGP17813 658 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 VCLP18206 1134 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 BGNP21810 368 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 GP5P40197 560 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 CTSCP53634 463 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 ATXN3P54252 364 aaPredicted RBP14.23□□□□□ -0.13
SGCE-202ENST00000415788 CSE1LP55060 971 aaKnown RBP14.23□□□□□ -0.13
SGCE-202ENST00000415788 HLA-BQ31612 363 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 CNPY1Q3B7I2 92 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 LIN52Q52LA3 116 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 PTRHD1Q6GMV3 140 aaKnown RBP14.23□□□□□ -0.13
SGCE-202ENST00000415788 CRTC3Q6UUV7 619 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 IZUMO2Q6UXV1 221 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 SH2D5Q6ZV89 423 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 FSTL5Q8N475 847 aaPredicted RBP14.23□□□□□ -0.13
SGCE-202ENST00000415788 CLDN19Q8N6F1 224 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 PNPLA1Q8N8W4 532 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 BIRC8Q96P09 236 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 NMUR2Q9GZQ4 415 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 IQCGQ9H095 443 aaKnown RBP14.23□□□□□ -0.13
SGCE-202ENST00000415788 GAREM1Q9H706 876 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 SEMA4GQ9NTN9 838 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 PCMTD2Q9NV79 361 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 NDUFA13Q9P0J0 144 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 SPASTQ9UBP0 616 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 KLF15Q9UIH9 416 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 PNMA8BQ9ULN7 279 aaPredicted RBP14.23□□□□□ -0.13
SGCE-202ENST00000415788 GPSM3Q9Y4H4 160 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 A0A1B0GTQ1 180 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 C17orf113A0A1B0GUU1 675 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 SGTAO43765 313 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 CTSEP14091 401 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 PKMP14618 531 aaKnown RBP14.23□□□□□ -0.13
SGCE-202ENST00000415788 SPEM2Q0P670 501 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 ILF3Q12906 894 aaKnown RBP eCLIP14.23□□□□□ -0.13
SGCE-202ENST00000415788 LRRC23Q53EV4 343 aaPredicted RBP14.23□□□□□ -0.13
SGCE-202ENST00000415788 GRTP1Q5TC63 336 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 RIPOR1Q6ZS17 1223 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 ACAD11Q709F0 780 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 ZNF547Q8IVP9 402 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 CCDC97Q96F63 343 aaPredicted RBP14.23□□□□□ -0.13
SGCE-202ENST00000415788 PRR11Q96HE9 360 aaPredicted RBP14.23□□□□□ -0.13
SGCE-202ENST00000415788 FAM111AQ96PZ2 611 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 SIKE1Q9BRV8 207 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 RHOJQ9H4E5 214 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 MKS1Q9NXB0 559 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 SLC17A6Q9P2U8 582 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 PRSS21Q9Y6M0 314 aa14.23□□□□□ -0.13
SGCE-202ENST00000415788 SDK1Q7Z5N4 2213 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 LNP1A1A4G5 178 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 GOLGA8RI6L899 631 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 COPEO14579 308 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 POP7O75817 140 aaKnown RBP14.22□□□□□ -0.13
SGCE-202ENST00000415788 PIAS2O75928 621 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 UBTFL6P0CB48 400 aaPredicted RBP14.22□□□□□ -0.13
SGCE-202ENST00000415788 GABRB3P28472 473 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 CCT8P50990 548 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 ELOCQ15369 112 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 INSCQ1MX18 579 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 ZNF542PQ5EBM4 170 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 ZNF789Q5FWF6 425 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 TCEAL6Q6IPX3 200 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 CNSTQ6PJW8 725 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 CHST15Q7LFX5 561 aaPredicted RBP14.22□□□□□ -0.13
SGCE-202ENST00000415788 AMZ2Q86W34 360 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 ZC3HC1Q86WB0 502 aaKnown RBP14.22□□□□□ -0.13
SGCE-202ENST00000415788 ULK2Q8IYT8 1036 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 B4GALNT2Q8NHY0 566 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 KCNJ9Q92806 393 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 TCEAL3Q969E4 200 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 CCM2Q9BSQ5 444 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 LRRC61Q9BV99 259 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 GSDMCQ9BYG8 508 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 SMOC1Q9H4F8 434 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 PSAT1Q9Y617 370 aa14.22□□□□□ -0.13
SGCE-202ENST00000415788 KPNA5O15131 536 aa14.21□□□□□ -0.13
SGCE-202ENST00000415788 ZNF883P0CG24 379 aa14.21□□□□□ -0.13
SGCE-202ENST00000415788 ACP5P13686 325 aa14.21□□□□□ -0.13
SGCE-202ENST00000415788 FMO4P31512 558 aa14.21□□□□□ -0.13
SGCE-202ENST00000415788 SPRP35270 261 aaPredicted RBP14.21□□□□□ -0.13
SGCE-202ENST00000415788 CLCNKAP51800 687 aa14.21□□□□□ -0.13
SGCE-202ENST00000415788 PLOD1Q02809 727 aaPredicted RBP14.21□□□□□ -0.13
SGCE-202ENST00000415788 DMPKQ09013 629 aa14.21□□□□□ -0.13
SGCE-202ENST00000415788 PRRT3Q5FWE3 981 aa14.21□□□□□ -0.13
SGCE-202ENST00000415788 CTSL3PQ5NE16 218 aa14.21□□□□□ -0.13
SGCE-202ENST00000415788 LGSNQ5TDP6 509 aa14.21□□□□□ -0.13
SGCE-202ENST00000415788 C11orf96Q7Z7L8 435 aa14.21□□□□□ -0.13
SGCE-202ENST00000415788 RBM15BQ8NDT2 890 aaKnown RBP14.21□□□□□ -0.13
SGCE-202ENST00000415788 OR2L2Q8NH16 312 aa14.21□□□□□ -0.13
SGCE-202ENST00000415788 FAM81AQ8TBF8 368 aa14.21□□□□□ -0.13
SGCE-202ENST00000415788 GPBAR1Q8TDU6 330 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms