RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 PROKR1Q8TCW9 393 aa14.89□□□□□ -0.03
DDX56-202ENST00000415758 P3H4Q92791 437 aa14.89□□□□□ -0.03
DDX56-202ENST00000415758 NACC2Q96BF6 587 aa14.89□□□□□ -0.03
DDX56-202ENST00000415758 PTERQ96BW5 349 aa14.89□□□□□ -0.03
DDX56-202ENST00000415758 DCUN1D1Q96GG9 259 aa14.89□□□□□ -0.03
DDX56-202ENST00000415758 GBP5Q96PP8 586 aa14.89□□□□□ -0.03
DDX56-202ENST00000415758 FSD1LQ9BXM9 530 aa14.89□□□□□ -0.03
DDX56-202ENST00000415758 COG4Q9H9E3 785 aa14.89□□□□□ -0.03
DDX56-202ENST00000415758 AGPAT4Q9NRZ5 378 aa14.89□□□□□ -0.03
DDX56-202ENST00000415758 P4HTMQ9NXG6 502 aa14.89□□□□□ -0.03
DDX56-202ENST00000415758 FKBPLQ9UIM3 349 aa14.89□□□□□ -0.03
DDX56-202ENST00000415758 PTRH2Q9Y3E5 179 aaKnown RBP14.89□□□□□ -0.03
DDX56-202ENST00000415758 F5H423 210 aaPredicted RBP14.88□□□□□ -0.03
DDX56-202ENST00000415758 IFRD1O00458 451 aaPredicted RBP14.88□□□□□ -0.03
DDX56-202ENST00000415758 OR2B3O76000 313 aa14.88□□□□□ -0.03
DDX56-202ENST00000415758 FOLR3P41439 243 aa14.88□□□□□ -0.03
DDX56-202ENST00000415758 TPM4P67936 248 aa14.88□□□□□ -0.03
DDX56-202ENST00000415758 DCDP81605 110 aaKnown RBP14.88□□□□□ -0.03
DDX56-202ENST00000415758 RPA4Q13156 261 aa14.88□□□□□ -0.03
DDX56-202ENST00000415758 BOP1Q14137 746 aaKnown RBP14.88□□□□□ -0.03
DDX56-202ENST00000415758 TCEAL1Q15170 157 aa14.88□□□□□ -0.03
DDX56-202ENST00000415758 SPESP1Q6UW49 350 aa14.88□□□□□ -0.03
DDX56-202ENST00000415758 CUZD1Q86UP6 607 aa14.88□□□□□ -0.03
DDX56-202ENST00000415758 ZC3H18Q86VM9 953 aaKnown RBP14.88□□□□□ -0.03
DDX56-202ENST00000415758 KCNMB4Q86W47 210 aa14.88□□□□□ -0.03
DDX56-202ENST00000415758 NXPE1Q8N323 547 aa14.88□□□□□ -0.03
DDX56-202ENST00000415758 PHC3Q8NDX5 983 aa14.88□□□□□ -0.03
DDX56-202ENST00000415758 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.88□□□□□ -0.03
DDX56-202ENST00000415758 ULK4Q96C45 1275 aa14.88□□□□□ -0.03
DDX56-202ENST00000415758 RBM41Q96IZ5 413 aaKnown RBP14.88□□□□□ -0.03
DDX56-202ENST00000415758 COPS8Q99627 209 aa14.88□□□□□ -0.03
DDX56-202ENST00000415758 NRTNQ99748 197 aa14.88□□□□□ -0.03
DDX56-202ENST00000415758 AP1M1Q9BXS5 423 aa14.88□□□□□ -0.03
DDX56-202ENST00000415758 ZBTB20Q9HC78 741 aaPredicted RBP14.88□□□□□ -0.03
DDX56-202ENST00000415758 FAM60AQ9NP50 221 aa14.88□□□□□ -0.03
DDX56-202ENST00000415758 ATP13A2Q9NQ11 1180 aa14.88□□□□□ -0.03
DDX56-202ENST00000415758 ACTR10Q9NZ32 417 aa14.88□□□□□ -0.03
DDX56-202ENST00000415758 GPN3Q9UHW5 284 aaPredicted RBP14.88□□□□□ -0.03
DDX56-202ENST00000415758 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.88□□□□□ -0.03
DDX56-202ENST00000415758 DOCK10Q96BY6 2186 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 IGLV3-16A0A075B6K0 115 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 HACD1B0YJ81 288 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 CFAP99D6REC4 459 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 HCRTR1O43613 425 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 ANXA9O76027 345 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 PDHA2P29803 388 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 ADRA1AP35348 466 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 GLRBP48167 497 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 GEMP55040 296 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 LLGL1Q15334 1064 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 TFDP3Q5H9I0 405 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 IGFL2Q6UWQ7 119 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 PPP1R32Q7Z5V6 425 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 SNX20Q7Z614 316 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 LUZP1Q86V48 1076 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 C19orf47Q8N9M1 422 aaKnown RBP14.87□□□□□ -0.03
DDX56-202ENST00000415758 OR8K1Q8NGG5 319 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 QKIQ96PU8 341 aaKnown RBP eCLIP14.87□□□□□ -0.03
DDX56-202ENST00000415758 DNAJC7Q99615 494 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 GORASP1Q9BQQ3 440 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 KLHL25Q9H0H3 589 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 DEF6Q9H4E7 631 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 RSPH14Q9UHP6 348 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 CRLS1Q9UJA2 301 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 CNTRLQ7Z7A1 2325 aa14.87□□□□□ -0.03
DDX56-202ENST00000415758 NUP210LQ5VU65 1888 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 AGPSO00116 658 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 CNOT3O75175 753 aaKnown RBP14.86□□□□□ -0.03
DDX56-202ENST00000415758 CRTAMO95727 393 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 UMODP07911 640 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 GSTM1P09488 218 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 COMTP21964 271 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 ELAVL4P26378 380 aaKnown RBP14.86□□□□□ -0.03
DDX56-202ENST00000415758 GSTM4Q03013 218 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 AIMP2Q13155 320 aaKnown RBP14.86□□□□□ -0.03
DDX56-202ENST00000415758 ZIC1Q15915 447 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 GPR33Q49SQ1 333 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 TLDC1Q6P9B6 456 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 PPP4R1Q8TF05 950 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 COG1Q8WTW3 980 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 TFGQ92734 400 aaPredicted RBP14.86□□□□□ -0.03
DDX56-202ENST00000415758 N4BP2L2Q92802 583 aaPredicted RBP14.86□□□□□ -0.03
DDX56-202ENST00000415758 OR2A14Q96R47 310 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 SPRTNQ9H040 489 aaPredicted RBP14.86□□□□□ -0.03
DDX56-202ENST00000415758 GBA3Q9H227 469 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 XKR8Q9H6D3 395 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 VPS37BQ9H9H4 285 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 IFT80Q9P2H3 777 aaPredicted RBP14.86□□□□□ -0.03
DDX56-202ENST00000415758 NDOR1Q9UHB4 597 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 SRPK3Q9UPE1 567 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 ENTPD4Q9Y227 616 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 CDYLQ9Y232 598 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 CROCCQ5TZA2 2017 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 ZGRF1Q86YA3 2104 aa14.86□□□□□ -0.03
DDX56-202ENST00000415758 APCP25054 2843 aa14.85□□□□□ -0.03
DDX56-202ENST00000415758 TRBV5-4A0A0C4DH59 114 aa14.85□□□□□ -0.03
DDX56-202ENST00000415758 ZSCAN9O15535 394 aaPredicted RBP14.85□□□□□ -0.03
DDX56-202ENST00000415758 HNRNPRO43390 633 aaKnown RBP14.85□□□□□ -0.03
DDX56-202ENST00000415758 PSTPIP1O43586 416 aa14.85□□□□□ -0.03
DDX56-202ENST00000415758 AKR1B10O60218 316 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms